| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5717 |
|---|
| Symbol | |
|---|
| ID | 4314624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 169045 |
|---|
| End bp | 170457 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638153559 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_777598 |
|---|
| Protein GI | 115360461 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.542393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGA CACCGCTGCC CGCCCTGCTC GACGAAATCC TGCTCGCCGT CACGCGCCGC
TATCAGTTGC CGCCGTTCGA CGGCGCGCCG ACGCCGGCCG ATGCCGCGAA CCCGGCGGCA
ACCCTCGCGC GCGTGATCGA GGACGCACGC CGGATGCTGG CCGATGGCCG GTCTCCCGGC
ACGGCGCTGC GGCAGCGCTT CATCGATGCC CTTGCGCACA TGATCCGCGC TGCGATGGAT
CCGCATGCCG GCGATCACGC GTTTCAGGCG TCGGTCCTGC GGCACGACGC GCCGAGCGTG
CGCGAATACG CATCGCTGCA CGCGCACGCC GAGCAGGACC GGCGCGCGCT GCACTCGGCC
GTCAACGCGA TCGCGCACCC GGCCAAACTC GAGCGCAGCG CGCAGGCGTG GCAACGCGAC
GGGCTCGCGC GGTTGCATGC GGCCGCAACG TCCGGATCGT GGAGCGAGCT CCATGCCACG
CTGGAGCAGT TGCTCGCGCT GCCCGGCATG GCGACCAACA CCGCTTTCGA GCAGGACATC
GTGAAGTTGA AGGACGGTGC CGCGCTCGAA CGCTTGCTGC GTCTCGACGC GCTGGCAGCG
GACGAGCACG TCCGTCGATA CCGCGCACTG TGGGTCCGGC AAGGTCCGCT CGAAGGCAGC
ACGGTGGCCG TCGCGCAGGG CGTCGCGTCC CAGCAGCGCG GCGCGGCCGT CGAAGCGCTG
GCCGCGCAGG CGCTCGACGC ACTGGCCCGC CGGCTCGACG CGGTGGACCC GCAGCGCACG
TACCGCGTGG TCACGTCGAT GCGCGTGCCG TCATCGATAC CGGGCCGCCA CGACCGCGCG
AAAACCGAAT GGGATGCAAT CCTGCTCGAA CGCACGCGCG GCGACGAAGC GGCGCCCGTG
TGGAACGTGC GCTTCCTCGT CGAGGCGAAG GCGTCGGCGG ACGCCGCGAC GACCGATTTG
CCGCGATTGC TGCGCGGCCT GAACCTGCTC GCGCAGGCCG ACGCGGACAC GATCTATTCG
TTCGAGACGC ACCAGGGCAC GGTGCGCGTG CACGGCGCGT CGCTGCGCGC ATTGACGACC
GACGCCGCGG CGCTGCAGCG GGAAGTACTC TATTGCTGCG ATGCGTCCGC GGACGCGACG
CCGCGCCTGC TGGGCGCCGC GAGCCGGATG CAGTTGCTGT CGGCGCAGGC GAGCCTCGAA
TACGCGAGCG CGCTCGCGCG GCAGCCCGAT GCCGATCCGG CCGGCCTCGG TGTGATCTGG
CAGGCGCTGC TGACGCAGCC GCAATGGCAT GCGGTGCTGC ATCAATACCC GTCGTTGCGG
CAGGTGCGCG AACTGATGGT GGCAATCGAC GACTTGCGCG CCGCGATCGA TGACGCGGAC
GAAGGCGGCG TCGCGAGCAG CGCGTGCGCG TGA
|
|---|
| Protein sequence | MSLTPLPALL DEILLAVTRR YQLPPFDGAP TPADAANPAA TLARVIEDAR RMLADGRSPG
TALRQRFIDA LAHMIRAAMD PHAGDHAFQA SVLRHDAPSV REYASLHAHA EQDRRALHSA
VNAIAHPAKL ERSAQAWQRD GLARLHAAAT SGSWSELHAT LEQLLALPGM ATNTAFEQDI
VKLKDGAALE RLLRLDALAA DEHVRRYRAL WVRQGPLEGS TVAVAQGVAS QQRGAAVEAL
AAQALDALAR RLDAVDPQRT YRVVTSMRVP SSIPGRHDRA KTEWDAILLE RTRGDEAAPV
WNVRFLVEAK ASADAATTDL PRLLRGLNLL AQADADTIYS FETHQGTVRV HGASLRALTT
DAAALQREVL YCCDASADAT PRLLGAASRM QLLSAQASLE YASALARQPD ADPAGLGVIW
QALLTQPQWH AVLHQYPSLR QVRELMVAID DLRAAIDDAD EGGVASSACA
|
|---|
| |