Gene Bamb_5715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5715 
Symbol 
ID4314622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp168002 
End bp168763 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content71% 
IMG OID638153557 
Product2-keto-4-pentenoate hydratase-like protein 
Protein accessionYP_777596 
Protein GI115360459 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.480508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGA CTACCGAACG CGTGGACGGC GCCGCCCAGC ATCTCGTCGC CGCCCGCCAT 
GCCGGCGCGC CCGGCCCGCT GCTGCCCGAC GCCTTCCGCC CCGAGAACGT CGACACCGCG
CTCGCGATCC AGCATCGCGT CGCCGATCTG CTCGGCGAAA CGATCGGCGG ATGGAAATGC
GCATTGCCGC CGCCCGACCG CGTGATCGTC GCGCCGATCT TCGCGTCGAC GATTCGCGAA
GCCGATGCGC CGTACCGCGT CGTCGGCGGC CCGATCGTGC GGATCGAGCC GGAAATCGCG
TTCGTGCTCG CGCGCGACCT GCCGGCCCGC GCGCAGCCGT ACGACGAGAA CGACGTGCGC
GGCGCGATCC GCGAAGTGCG CATCGTGCTC GAGGTATTGG GCTGCCGCTA TGCGGAGCCC
GCGCGCGCGT CGAAGTTCGA ACTGCTCGCC GACGGGCAGT TCAACCAGGG GCTGTGCGTG
GGCCCCGTTG TGCCGGACGG GCTGAACGTG CCGCTCGAGA CGCTCGCGCT GTCGTTCGAG
GGCGCACTGA ATCGCACGAT CGACGGCCGC CATCCGGACG GCGATCCGCT CAAGCCGCTC
GTATGGCTGG TGAATTTCCT CGCGTCGCGC GGTGACGGCG CACGCGCCGG CCAGATCGTG
ACGACCGGCT CGTATGCGGG CGCGATCGAC GTGCCGCTCG GCGATGCGCT GACCGTGCGC
TTCGGCGAGC TCGGCAGCCT GTCGGTGACG CTGACGGCGT AA
 
Protein sequence
MTTTTERVDG AAQHLVAARH AGAPGPLLPD AFRPENVDTA LAIQHRVADL LGETIGGWKC 
ALPPPDRVIV APIFASTIRE ADAPYRVVGG PIVRIEPEIA FVLARDLPAR AQPYDENDVR
GAIREVRIVL EVLGCRYAEP ARASKFELLA DGQFNQGLCV GPVVPDGLNV PLETLALSFE
GALNRTIDGR HPDGDPLKPL VWLVNFLASR GDGARAGQIV TTGSYAGAID VPLGDALTVR
FGELGSLSVT LTA