| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5707 |
|---|
| Symbol | |
|---|
| ID | 4314614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 157821 |
|---|
| End bp | 158609 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638153549 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_777588 |
|---|
| Protein GI | 115360451 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.832582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG TTCTCTCCGA AGTCGCGACG CTGCCGCTGA CGATCAACGG CATTGCGATC
GACGACGCGG CCATCGCGGC CGAAGCCGCG CATCACGGCG ATGCGCGCGA TCCGCTCGAC
GCGGCACGGC ATGCGCTTGC GGTGCGCGAG CTGTTGCGTC AGCGCGCGGT GGCGCTCGCG
CTGATCGACG AACGCGCGCC GCTCGACGAC GCGACGGTCG ACGCGCTGCT CGAATGCGAG
CTGACGCACG TGCCTGAACC CGATCGAGCG GATTGCGAGC GCTACTACGC GCAGCATCCG
GCGCGCTTTC GCCGCAACGA CATCGTTTAT GCAAGCCACG TGCTGTTCGC GGTGACCGAC
CGCGTGCCGC TCGCGCCGCT GCGGCAGCGC GCGGAACGTG CGCTCGCCGA CGTGGTCGCC
GCGCCCGATA CGTTCGAAGC AGTGGCGCGC GAATCGTCGA ACTGTCCGTC GGCGCAAGTC
GGCGGCAGCC TCGGGCAACT GCTGCGCGGC GACACCGTGC CGGAATTCGA GGCCGCGCTG
TTCGATACAG ACGGGCTCGG CGTGCTGCCG AAACTCGTCG ACACGCGCTT CGGCTTTCAC
ATCGTGCGCA TCGAGCGCCG CATACCGGGC GACGTCGTGC CGTTCGACGA AGCCGCCGGC
CAGATCGCCG CGTACCTGTC GGAACGCGTG CGGCAACGGG CGATGCGGCA ATACGTGGCG
ATACTCGCGG CCGGCGCGCG CGTCGAAGGC GTGACCTTCG ACGGCGCGAA CGGGCCGCTC
GTCCAATGA
|
|---|
| Protein sequence | MNDVLSEVAT LPLTINGIAI DDAAIAAEAA HHGDARDPLD AARHALAVRE LLRQRAVALA
LIDERAPLDD ATVDALLECE LTHVPEPDRA DCERYYAQHP ARFRRNDIVY ASHVLFAVTD
RVPLAPLRQR AERALADVVA APDTFEAVAR ESSNCPSAQV GGSLGQLLRG DTVPEFEAAL
FDTDGLGVLP KLVDTRFGFH IVRIERRIPG DVVPFDEAAG QIAAYLSERV RQRAMRQYVA
ILAAGARVEG VTFDGANGPL VQ
|
|---|
| |