Gene Bamb_5706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5706 
Symbol 
ID4314613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp156540 
End bp157805 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content68% 
IMG OID638153548 
Productmajor facilitator transporter 
Protein accessionYP_777587 
Protein GI115360450 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.899176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTC AACAAGGTAA CGTCGGCGTG GCTGCGGATC CGCAGGCCAT TCCGCTGCGC 
GCGTGGTCGG TGCTGGCCGC GAGCACGCTC GCGTTCATGG TGTGTTTCGT CGTGTGGATG
ATGTTCGGCG TGCTCGGCGT GCAGTTGCGC GCCGATCTCG GCCTGAACAG CACCGAGTTC
GGGCTGCTCA CGGCGACGCC CGTGCTGACC GGCGCGCTGA TGCGCTTGCC GCTCGGCACG
TGGACCGACC GCTTCGGTGG CCGTATCGTG ATGACGGTGC TGCTCGTCGT GTGCGCGGTG
CCGGTCTACA TCGTCAGCTA CGCGACGCAG CTCTGGCAGT TCCTCGTGAT CGGGCTGTTC
CTCGGCTGCG TCGGCGCGTC GTTCGCGGTC GGCACGCCGT ATGTCGCGCG CTTTTTCCCG
CCGAAGCGGC GCGGGCTCGC GATGGGCGTG TTCGGCGCGG GCACCTGCGG CGCGGCGGTC
AACCTGTTCG TCACGCCGCT GCTGCTCGCC GCGTACGGCT GGCGCTTCGT GCCGCGCGTG
TATGCGATCG CGCTGCTCGT CACGGCCGTG ATCTTCTGGT TCGCGTCGGC GCCCGATCCC
GGCGCCGGCA AGCGCGGCGG CTCGATGCTC GATTCGTTCA AGGTGCTGCG CGACCCGCGC
GTGTGGCGGC TGTGCCAGTA CTACTCGATC ACGTTCGGCG GCTTCACCGC GCTGTCGCTG
TGGATCCCGC AGTACCTGAA GAGCGAATAC GGGATGTCGC TCGTGATGGC GTCCGCGTTC
GCGGCCGGTT TCTCGCTGCC GGGCTCGGTG CTGCGCGCGC TCGGCGGCGC GCTGTCCGAT
CGCTTCGGCG CGCATGCGGT CACGTGGTGG GGGCTGTGGG TCGCATGGAT CGCGCTGTTC
CTGCTGTCGT ATCCGGCGAC CGACTTCGTG ATCCACACGA TCGACGGGAC CGCGTCGCTG
AACCTGGCGA TGCCGGTGGC CGGCTTCGTC GCGCTGACCT TCGTGCTGGG CGCGGTGTTC
GCGTTCGGGA TGGCGTCGAC CTTCAAATAC GTCGCCGACG ATTTCGCGGA CAACATGGGC
GTCGTCACGG GCATCGTCGG CCTTGCGGGC GGGCTCGGCG GCTTCCTGCT GCCGATCCTG
TTCGGCATGC TGCTCGACCT GCTGCGCGTG CGCACGACCT GCTTCATGTT TCTGTACGGA
ATCGTGTGGG TATCGCTGAT CCTCATCTAT CTGTCGGAAG TGCGGCGCAC GCCCGTGGCG
GGTTGA
 
Protein sequence
MATQQGNVGV AADPQAIPLR AWSVLAASTL AFMVCFVVWM MFGVLGVQLR ADLGLNSTEF 
GLLTATPVLT GALMRLPLGT WTDRFGGRIV MTVLLVVCAV PVYIVSYATQ LWQFLVIGLF
LGCVGASFAV GTPYVARFFP PKRRGLAMGV FGAGTCGAAV NLFVTPLLLA AYGWRFVPRV
YAIALLVTAV IFWFASAPDP GAGKRGGSML DSFKVLRDPR VWRLCQYYSI TFGGFTALSL
WIPQYLKSEY GMSLVMASAF AAGFSLPGSV LRALGGALSD RFGAHAVTWW GLWVAWIALF
LLSYPATDFV IHTIDGTASL NLAMPVAGFV ALTFVLGAVF AFGMASTFKY VADDFADNMG
VVTGIVGLAG GLGGFLLPIL FGMLLDLLRV RTTCFMFLYG IVWVSLILIY LSEVRRTPVA
G