| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5705 |
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| Symbol | |
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| ID | 4314612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 154704 |
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| End bp | 156440 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638153547 |
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| Product | phage integrase family protein |
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| Protein accession | YP_777586 |
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| Protein GI | 115360449 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.782513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC GCCTCACCCT GCCGCCTTCC TCCGATTCCG CGCCCGCGCT CGCGGGCTTT
CCCGACGCCG ACGAACTCGC CGCGCTGCGT GCGTGGTACG CGGGCATGAC CGTGCGCCAG
GCCGTCGAGC GCTACCTGCC CGGGCGGCTC GGCGAAGGGC GCTCGGCTCG CGGCGTGATC
GGTGCCATTC GGCGTCGCCT CGTGCGGTTC GCGCGGCAGG CCGGACGGCC CGATCTCGCC
GAGCAGCTCG GCCATGCCGA CCGCGAGCGC GTGCAGATGG CGAAGGCCGC GACCGATGCG
ATCGGCGTGC TACGCCATGC GCGCGCGCCG GTGCCGCAGA TCAGCGACGA CGTCGGCCTG
TGGCTGCCGG CGCGTGCGGT CGCCGCGCTG CGTGCGCACG GGATCGCGAC GCTCGCCGAC
CTGACCGTGC GGATTCCGCG GCGGCGTCAG TGGTGGCGCG CGATCGCGGG GCTCGGCGTG
GCGAGCGCGC GGCATATCGA GGCGTTCTTT TCCGCGCATC CGGACCTGAC CGAGCGGGCG
CGCGCGCTGA TCGCCGCGAC GCCGCGCGGC AGCATCGTGC CGTGGGAGCA ACTGAAACTG
CCGCACGAGG TCGACGGATC GGCCGGCACG TTCCGCGCGC CGCGCGCCAC CAGCACGCTC
GATGCGGACA ACGACTACGC GGCCGTGCAC GCGTGGTTGT CGCTGCACGA ATCGGCCGCG
ACGCGACGCG CGTACCGGAA GGAGGCCGAG CGGCTGATCC TGTGGGCGAT CGTCGAGCGC
GGCCGTGCGC TGTCGTCGCT GACGACCGAG GATGCGGTCG CGTATCGCGC GTTCATCCGG
CGCCCGACGC CGCACGAGCG CTGGGTCGGC CCCGTGCGGC CGCGCGGCGC GCCGGACTGG
CGGCCGTTTT CGGGCGGATT GTCCGCGCGC TCGGCCGCGT ACACGCTGTC GGTCCTCGGC
GCGCTGTTCC GCTGGCTGAT CGAGCAGCGC TACCTGCTCG CGAATCCGTT CGCGGGTGTC
AAGGTGCGCG ACACGCGCGG CGCGAATGCG CTCGACACGT CGCATGCGTT CACCGAAGGC
GAATGGCTGC TCGTGCGCAC GATCGCGGAC GGGCTCGAGT TTCGCAAGGA CAGGCCGTCC
GGCGCGCCGG GGTCCGGCTG GACGCCGGCC GCCGCGCAAC GGCTGCGCTT CATCCTCGAT
TTCGGCTATG CGACCGGACT GCGCGCGAGC GAGCTGGTCG GCGCGACGCT CGGCGACATC
GACACGGACG CGCACGGCGA CGCGTGGCTG AAGGTGATCG GCAAAGGCAG CAAGGCCGCG
CGCGTCGCGC TGCCGCCGCT CGCGCGCACG GCACTCGATC GCTATCTGGT CGCACGCCGG
CTGCCGGTCA CGCCGGTGCG CTGGCGGCCC GATACGCCGC TGATTCCGAG CCTCGCGGAA
GACGGCGCGG CCGCGATCAC GAGCATGCGG CTGTGGAAGG TGATGCAGCG TTTCTTCGCG
CAGACGGCCG CGCTCGTCGA TGCCGACAAC CCCGCGCTCG CGCAGAAGCT GCGGCAGGCG
AGCCCGCACT GGATGCGGCA TACGCATGCG ACGCACGCGC TCGCGCGGGG CGCCGAGTTG
ACGACGGTGC GCGACAACCT GCGGCATGCG TCGATCTCGA CGACGTCGAT CTATCTGCAC
GGGGATGACG TGAAGCGGGC ACGGCAGATG TCGAGTGCGT TTTCGGCCGA CAAATAA
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| Protein sequence | MTPRLTLPPS SDSAPALAGF PDADELAALR AWYAGMTVRQ AVERYLPGRL GEGRSARGVI
GAIRRRLVRF ARQAGRPDLA EQLGHADRER VQMAKAATDA IGVLRHARAP VPQISDDVGL
WLPARAVAAL RAHGIATLAD LTVRIPRRRQ WWRAIAGLGV ASARHIEAFF SAHPDLTERA
RALIAATPRG SIVPWEQLKL PHEVDGSAGT FRAPRATSTL DADNDYAAVH AWLSLHESAA
TRRAYRKEAE RLILWAIVER GRALSSLTTE DAVAYRAFIR RPTPHERWVG PVRPRGAPDW
RPFSGGLSAR SAAYTLSVLG ALFRWLIEQR YLLANPFAGV KVRDTRGANA LDTSHAFTEG
EWLLVRTIAD GLEFRKDRPS GAPGSGWTPA AAQRLRFILD FGYATGLRAS ELVGATLGDI
DTDAHGDAWL KVIGKGSKAA RVALPPLART ALDRYLVARR LPVTPVRWRP DTPLIPSLAE
DGAAAITSMR LWKVMQRFFA QTAALVDADN PALAQKLRQA SPHWMRHTHA THALARGAEL
TTVRDNLRHA SISTTSIYLH GDDVKRARQM SSAFSADK
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