| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5700 |
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| Symbol | |
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| ID | 4314590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 144442 |
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| End bp | 150756 |
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| Gene Length | 6315 bp |
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| Protein Length | 2104 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638153542 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_777581 |
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| Protein GI | 115360444 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.919762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTT TTTGTCCGAA TTGTCGAACC GAGCGGTCGG TCGACGAGTG GTTCTGTGCT
GGCACGGTCG GCGATGCTAT TTGCAACTGG GACTTGTCCG GCGTACTGAT CCGGGCGACC
GGCTGGCGCC CCCAGGATGT GATTACGGTC GAGACCGTCA ATCAGCAAGC GGATTCAGGC
GCATCGGGAG TCAGTGGGCA GACCTCATTG TCGTGCGCGA ACGGCCACCC GATGAACGAC
GGCGACCTCA TGTGCCTCGA ATGTGGCGCG GATCCGGCCG TGCCAGCCGA CGCGCAGCAG
CTCGGCGTCG GCGGTGAGGC TTCCGCAGAT CACTCGACGG AGGACTCGTC GCGGGTGCCT
CTCGAAGAAA CGCGGATCGA CGGCTGGCGA CTATTGCGCC AGATTTCCAG CACGGACGGC
GTGCGCGAAC GCTACGTGGC CCAGCAGGAC GAGAACGGCA GGCAGGCAAT CCTGACGCTT
TATCGACCAG GCGCCGAACC TGACCCGGCT GTCTACGATG TGGTTCGCCG CCTACCTCGC
GAGCACGTGC CGGACATCAT CGCTACCGGA CGGTGGGATC AACGTGCTTA CGAAGTCGCC
GAGGAGATGA GCGGCGGGAC GCTGGCGGAT CTCGGCATAG CCGTACGCGA TATCGCGACG
ATCCGCCATG TGATCGATGA ACTTGGTCAG GCCCTGCAGG CGTTTTCGGA CGTGGGTCTT
CGGCATCGGG ACCTGCGGCC CGGAACGCTG CTTGTGCGCA GTCGCGACCC CCTGGACCTC
GTCATCAGCG GTTTCGGTTC GGCACGACTG TCCGAATTCG ATCTCGATAT CGTCTCACCG
CTCGAAACGA CGCGCTATAT GGCGCCCGAG GCCATTGCAG GCGGTGTTGC CGCGGCGTCC
GACTGGTGGA GCCTCGGTAT GATCCTGCTC GAGCAGCTGA CCGACGGCCG CTGCTTCGAG
GGCATCAACC CGCGCGCGTT TCTGATTCAC GTGCTGGCCA ACGGCGTCAC GCTGCCGGAC
GATCTGGATC CGTCGCTTCA CCTCCTGCTG CGCGGCCTGC TGGCGCGTGA TCGGCATCAA
CGCTGGCAAT GGCCACAAGT CAGAGCCTGG CTGGACGGCA AACCGGTAGA TGCACCTTCG
GTAGCGCCTG TAGATTCCGA TAACGACGAA GGTGCCAGCA TCGCATTGGG CGCTCGGCTA
TATCGCAAGC CGGCGGTCTT CGCGCTGGCC GCTGCCGAGC GCGAGAATTG GGAAGCGGCA
CGCGACCATC TGAATCGCGG CGTTGTCTTG ACATGGGCTG AACAAGCCGG TGTCGGTGCG
AAAGCGCTGG CTGGCCTGCG TCAGGTTGCT CAACTCGACG GCGTTGATGA CGATTGCCGC
CTGATGATCG CGCTCAAGCT GTTGAATCCC GACATGCCGC TTATTCTGCG CGGCGATATT
GTCACGCCCG GTTGGTTGCT GCAAAACCCG TTGGAGGGTT ACGACCTGGT GACCGGGCCG
GTGCCAACAT TTCTGGAGCG ACTGGGCACC GAAAGCTGGC TGTCCAGGCT ACGCTCTCGA
GCCGATGAAG TGCGACACCG GGCCGCGCAT CTTGGCATCG AACTGGACGA GGACATGGTG
CGCGTCGCGC TGCTTTCCAC CTCGCGCGCC CAATTGGCCG CGCAATGGGA AGAGCGACGC
CTTTTGTTGC CGGATTCCGA TCATCACGGC CTGCTGTCGC TGTCGGAACG CCGAGTCCTG
AGCGAAGAAG ACCTTATCGT TCTGTTGAGC GCGGCAATTT CACAGTTTCG TTCGGTCGAC
GAGATCCTCG AACAAGCGGC AGTCATCGCA GAGCGAGAAC AAATTTTGGT CTTTGACCGC
GAGGCGGCCC GGTCCGCGCT TGCGCTTCCG CGCGTCGAGC TGTTCCACTC TGTCGATGAC
CGAATCGCAG GATTCGCGCG TACTGGAAAT CAGGCGGTCG ATGAATGGGC AGAGCAGTTC
CGATTAGAAC GTCGCTTGCC GCTGCACGAA GTGGTCGTTC TGTTGTCCGT TCCCGTCGAG
CAGTGGCTGG AACCGCAGAA GCAGCAATAC GTGTCGCAGA TTCTCGACTT CTTCGAGAAA
AAAGTCGCCA CAACCGTGTT GCGTGGTCCG TTGGTACGGA TGACCATCGG CAAAACCACG
GGACGGGTCG ATCTTCACGA ACTGAACGGC GAGCGATTCG CCAGCACCGC GCTGCTCGAC
CATCTGCTCC AACGCAATGT ACAGACGGTA TCGGTGGACC CAGCCGTGTT CGGTACAAGC
GGAACGCTAG AAGGCCGCTT GAACACGCTG TACCGGCAGA CTTCGCTCTA CAAGCGGGAT
ACCGGCATCG ACGGCCTCTA TCTGGGCTTC CCGTTCCTGC TTTACAAGGA TCATCGCGGC
ACGACGCGCC CTCGCATCGC CCCCGTCCTT TTGTGGCCCG TCAAATTGCT GATGGAGCTC
GGCACGCGAG GCCAGGTCGC GATGGCTTTT GACGGCGAGC GCGAGGAGGT TCGCCTGAAT
CCGGCGCTCG AGGGCTTGCT GGGGCGCGAG GCCGCCAAGG CATGGCGTGT CGCAGCCGAC
GAGGTGCTCG GACGTTCCGC GTTGAAAGCG GCCGACGTGG TCGATGCCTT CGGCCTGCTG
GCCGACGTGG AAAGTCGGAA ACTCGGCGCA CTGCCGTCGC CGACTCTCGA CATGCCCGTC
GGCGCGACGC GCCTCGCCTG CGCCGGTGTG CTCTTTCACG TCGACTTCGC CGGCCAGGCC
ATTGGCGAGG ATCTGCGTCA GCTCAAGCAA TTGTCGCCTT CCGGCACGGC GCTCGAATCG
ATGCTTCGGC TCAAGGACAA ATCCGCCTAC GATGCATCCG ACGCAGTCTC GACCGAACTC
GACCGATTCC TCACGGTGGC AAGCGATCCA TCGCAAGAAG CCGCCATCCT GCAGGCGCGT
CAGGGGCCCG GACTGCTGGT CGAAGGGCCG CCCGGTACCG GCAAGAGCCA GACAATTGTC
AACATGGTCG CCGACGCAAT CGGGCAAGGC CGAAGCTTGC TGATAGTCTG CCAGAAGCAT
GCCGCGCTGG ACGTCGTTCG TAAGCGGCTG GTCGCCGAAG GGCTGGGCGA TCGCATCGTG
ATGCTCAACG ACGTCAACAA GGACCGCGAG CCAACGATCC GCGCCGTCCG CGAGCAACTG
GATGCGATCT TCCGCGGCAC CGTGTTCGAT CAAGGATTGA TACGCCAGCG TGAACGCATG
GCCGCGAGAA TCGAGGCCCT TGAGGGCGAA CTTGATCGTC AGCATGCGGC GCTGCATCGC
ATCGACGAAT CAACCGGCCT TAGCTATCGG GCGCTGCTCG GCGAACTGAT CCGGCTCGAA
GCCGGTACAC CGCCTATCAG CGTGCCGCAA TTGCGTACAC GGCTTGCCAC GCTGGATATT
TCGACACTGA CAACACTAGA AGAACACTGT GCTCCGCTAG CACGATACTG GTTACCGTCG
AAGTTCGAAG GCAGTGCACT CGCGCAATTG AAACCGTTTG CGACGGATAC CGCCACGCTC
GAAGCGTTCA ATGCGATCTT CGCGGATTTC CGCGAGGCGG AGCGCCTGCG AATCGAGACG
CTCACTGCGC ATCCCGCGCG ATTCGATGTC GACGATCCCG CCCCATATCG GGCCTGGCTC
GATGCCAACG CCAGCCGCCT TGTCGCGCTG GACGATACAC AACGCAAACG GCTTGCGCAA
TGGTTGTCGC TATTTCGTCC GGCCGACCAT GCCGACGCGC AAGGCCATCG GTATTACACG
GCGCTCGGCG GCCTGCATCG CGATCTGTTG GCCGTTGAGA CCAGCGGCTT CGATGCCGTG
CTATCGGCAG CCGTCGCGCG CTTGCCCGAT CCAGAGCTCC GCAAGCTCGA GGCCCAGGCG
ACGTTGGCGA CTCGCGCCCC GTCTCTGATG CGCCGCCTTA ACCCGATCAC TTATCTGCGG
CGTGGTCGCT TGATGAAGTT CGTCACCCAC TGCGGCGCGC CCGCGACAGA CGAGACGCTC
CGGAAGCTGC TCGCTGCTGC CCGGCTCGAA AAGGCCTGGA GGCCGATGCG CGACACATTG
AACACGATCA GCCGGGCATT GAATCTCGAG ACGGTCGAGC CCACCTGTGG GCGGGCACTC
GCCGATGCCT GCCTGACCCG CCTGCGCCAG TTCGAGGAAA TTCGCGAACT CGCGCAGCAT
CTTGCGATCG CGCCACGCGG CGACGAGTTC GACTCGGCCG TGATGACCGG AGATCGAGCA
CCCGTCAAAC AGTTACTCGA CGGTTTCGAG ACCGCGTTTG TACGGCACAA CGCGCGCCAG
CACAGTCTTC GGGCGCTGAG CCCCCTCGAT GAGTGGCTTT CGGCAGAACT CTTCACCGCC
TGTCGGCAGG CAATTGCCGA CAACATCAAT CATCAGGCGC CGCTGAACCG GATCGGCGAT
GCGCTGCCGA CCTTGGCCGC CTATCAGCAA TTCCGAACCC GAGCACGGCA CCTTACCGCC
GAGGCGCTCG ACGTGTTTGC CACCGTGCGC GACCACGAAG ACTCGCTGAT GCGCGTGCCG
CCTGAACACC TCGACGACGC GGTGCGGCGC ATGATCAACC GCGAGGCGCG GCTCGGATGG
AAGCGTCGCA TGGAGCAGGA CAATCCTGAG TTGTTGCTCG ACCATAGCGA AACGACCGCA
AAGATCGACG CACTCGCGGC TGCCGACGAG GAAATGCGTC GTCTGAACCG CGAGATGCTT
CGCAACGGTA TAGACCACGG CAGACTGGGT TCAGCGCGTG ATTGGGAAGA CGTGACGCGT
TTGACCGGTC GCCGCTCCCG GCGTCTGCGC GAATTCATCG AACTCGGTAC GGAGCTTGGC
CTGATGGCGC TGCGGCCGGT CTGGTTGATG AATCCCGATG TCGCCAGCCG CGTACTGCCG
CTGAAATCAG GGTTGTTCGA TTCCGTCGTC TATGACGAAG CGTCTCAGAT GCCAGTGGAA
TACGCGATTC CGACGCTGTT CCGCGGCAAC TTGTCGATCG TCAGCGGCGA CGAGAAACAA
ATGCCGCCGA CGGCGTTCTT TTCGAGCCGA ACGGATAGCG ACGAAACGGA AATCTTCGAC
GGCGAGCAAC CCGACGAGGC GGCGACGGAA GACGAACGCG AGCGCTTCGA GGACACCTGG
AACCGACGTG AAATCAAGGA CTGCCCCGAC CTGCTGCAAC TGGCACGGAG CGCGCTGCCC
GTGTCGACGC TGCAGATTCA CTATCGTTCG GCATATCGAG AGCTGATCGG CTATTCAAAC
GCAGCGTTCT ACGAGAACAA CCTCAGCGTG CCCGTCCGTC ATCCGGATGC CACGGTGCGC
GAGGTGAAGC CGCTCGAACT CGTCCAGGTG AATGGTCTTT ACGAACAGCA GACCAACAGC
GAAGAAGCGG ATCGCGTGGT CGCGCATCTG GCGCAACTAT GGCAGCAGCC CTACGCACAG
CGCCCCTCCG TCGGCGTGGT CACATTCAAC CGCAAGCAAG CTGACCTCAT CCTGGAGCGC
CTGGAGCAGC GCGCGGAAGT GGATGAGGCA TTCCGCGATG CCTACCGTGA GGAACTCGAC
CGAACCGATC GTGGCGAGGA TATGGCCGTA TTCGTGAAGA ACGTCGAGAA TGTCCAAGGA
GACGAACGCG ACATCATCAT CTTTTCCACG ACCTTCGGGC GAAACGGCCA GGGAACCTTT
CGACGCATGT TTGGCGTGCT TGGCCAGAGC GGAGGCGAGC GTCGTCTCAA TGTGGCAGTG
ACGCGTGCCC GCCATAAAGT CGTGCTCATC ACGTCGATGC CCATCCGCGA GATCTCCGAC
ATGCTCACGA CGCAGCGCAA GCCGGCGATT CCGCGCGATT ACCTTCAGGG TTATATGGAA
TACGCACGTG CGATGTCGAA CGGTGAACTG CCCGCCGGCC GTGCATTGCT TGGCCGCATG
AGTAGCGAAC GGGCGCATGC GAAGTTGCGG CAGACGGGTG TCGTCGACGG ATTCGCGGAA
GATGTGCTTG CTTATCTGCA GGATCTCGGT CTGTCACCGG TGCCAGCACA GGAAGGCGAT
GCTTTCGGGC TTGATTTTGC GATTGCAAAC CCGGAAACCG GTCTTTACGC GATCGGCATC
GAGTGCGATG CGCCGCGTCA CCCCTTGCTC GAACATGCGC GAGCCCGGGA AATCTGGCGG
CCGTCCGTGC TGGGACGAGC CATTCCAAAA CTGCATCGCG TTTCGTCACA AGCCTGGTTC
CACGAACCGG AGACAGAGAA GGCACGCTTG AAAGCGGCCG TAGAACTGGC CCTGAGTCAG
GAGGTGACGG CATGA
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| Protein sequence | MMRFCPNCRT ERSVDEWFCA GTVGDAICNW DLSGVLIRAT GWRPQDVITV ETVNQQADSG
ASGVSGQTSL SCANGHPMND GDLMCLECGA DPAVPADAQQ LGVGGEASAD HSTEDSSRVP
LEETRIDGWR LLRQISSTDG VRERYVAQQD ENGRQAILTL YRPGAEPDPA VYDVVRRLPR
EHVPDIIATG RWDQRAYEVA EEMSGGTLAD LGIAVRDIAT IRHVIDELGQ ALQAFSDVGL
RHRDLRPGTL LVRSRDPLDL VISGFGSARL SEFDLDIVSP LETTRYMAPE AIAGGVAAAS
DWWSLGMILL EQLTDGRCFE GINPRAFLIH VLANGVTLPD DLDPSLHLLL RGLLARDRHQ
RWQWPQVRAW LDGKPVDAPS VAPVDSDNDE GASIALGARL YRKPAVFALA AAERENWEAA
RDHLNRGVVL TWAEQAGVGA KALAGLRQVA QLDGVDDDCR LMIALKLLNP DMPLILRGDI
VTPGWLLQNP LEGYDLVTGP VPTFLERLGT ESWLSRLRSR ADEVRHRAAH LGIELDEDMV
RVALLSTSRA QLAAQWEERR LLLPDSDHHG LLSLSERRVL SEEDLIVLLS AAISQFRSVD
EILEQAAVIA EREQILVFDR EAARSALALP RVELFHSVDD RIAGFARTGN QAVDEWAEQF
RLERRLPLHE VVVLLSVPVE QWLEPQKQQY VSQILDFFEK KVATTVLRGP LVRMTIGKTT
GRVDLHELNG ERFASTALLD HLLQRNVQTV SVDPAVFGTS GTLEGRLNTL YRQTSLYKRD
TGIDGLYLGF PFLLYKDHRG TTRPRIAPVL LWPVKLLMEL GTRGQVAMAF DGEREEVRLN
PALEGLLGRE AAKAWRVAAD EVLGRSALKA ADVVDAFGLL ADVESRKLGA LPSPTLDMPV
GATRLACAGV LFHVDFAGQA IGEDLRQLKQ LSPSGTALES MLRLKDKSAY DASDAVSTEL
DRFLTVASDP SQEAAILQAR QGPGLLVEGP PGTGKSQTIV NMVADAIGQG RSLLIVCQKH
AALDVVRKRL VAEGLGDRIV MLNDVNKDRE PTIRAVREQL DAIFRGTVFD QGLIRQRERM
AARIEALEGE LDRQHAALHR IDESTGLSYR ALLGELIRLE AGTPPISVPQ LRTRLATLDI
STLTTLEEHC APLARYWLPS KFEGSALAQL KPFATDTATL EAFNAIFADF REAERLRIET
LTAHPARFDV DDPAPYRAWL DANASRLVAL DDTQRKRLAQ WLSLFRPADH ADAQGHRYYT
ALGGLHRDLL AVETSGFDAV LSAAVARLPD PELRKLEAQA TLATRAPSLM RRLNPITYLR
RGRLMKFVTH CGAPATDETL RKLLAAARLE KAWRPMRDTL NTISRALNLE TVEPTCGRAL
ADACLTRLRQ FEEIRELAQH LAIAPRGDEF DSAVMTGDRA PVKQLLDGFE TAFVRHNARQ
HSLRALSPLD EWLSAELFTA CRQAIADNIN HQAPLNRIGD ALPTLAAYQQ FRTRARHLTA
EALDVFATVR DHEDSLMRVP PEHLDDAVRR MINREARLGW KRRMEQDNPE LLLDHSETTA
KIDALAAADE EMRRLNREML RNGIDHGRLG SARDWEDVTR LTGRRSRRLR EFIELGTELG
LMALRPVWLM NPDVASRVLP LKSGLFDSVV YDEASQMPVE YAIPTLFRGN LSIVSGDEKQ
MPPTAFFSSR TDSDETEIFD GEQPDEAATE DERERFEDTW NRREIKDCPD LLQLARSALP
VSTLQIHYRS AYRELIGYSN AAFYENNLSV PVRHPDATVR EVKPLELVQV NGLYEQQTNS
EEADRVVAHL AQLWQQPYAQ RPSVGVVTFN RKQADLILER LEQRAEVDEA FRDAYREELD
RTDRGEDMAV FVKNVENVQG DERDIIIFST TFGRNGQGTF RRMFGVLGQS GGERRLNVAV
TRARHKVVLI TSMPIREISD MLTTQRKPAI PRDYLQGYME YARAMSNGEL PAGRALLGRM
SSERAHAKLR QTGVVDGFAE DVLAYLQDLG LSPVPAQEGD AFGLDFAIAN PETGLYAIGI
ECDAPRHPLL EHARAREIWR PSVLGRAIPK LHRVSSQAWF HEPETEKARL KAAVELALSQ
EVTA
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