| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5693 |
|---|
| Symbol | |
|---|
| ID | 4314583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 134727 |
|---|
| End bp | 135650 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153535 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_777574 |
|---|
| Protein GI | 115360437 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.45057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTG ACCACGATGG TGAGTTTGGA TCACAGAACG TCCGTGCCGC GCTGCCGTCG
CTGATGGCGC TGCGCTGCTT CGAGGCGGCG GCGCGCCACG AGCATTTCAG CCGTGCCGCC
GACGAACTGC ATTTGACGCA CGGCGCCGTC AGTCGCGCGG TGCGTCTGCT CGAAGACGAC
CTGGGTGTGG CGTTGTTCGA GCGGCGCAGT CGTCGCGTGT TCCTGACCGA CGCGGGCCGC
AAGCTGGCGC AGGCCGTCCA TGACGGCCTG CATCTGATGA GGCAGGCCGC GCATGAGTTA
CGGACCGACG CGGCCCGTGC GCAGCGTTGG GTGCTGTCGT GCGAACCCAC GCTGCTGATG
CGCTGGCTGA TTCCGCGCTG GCCGGACTTC CAGGCGACCT ACCCGCGCGT CGATATCCAT
CTCGCCGCGG CGGGCGGCCC GTTCTCGTTC GATCACGGCA TCGATATCGC GATCCGCCGC
AACGATTTTG CGTGGCCTGC GGGGTATCAC GCCGAGCGAC TGTTTACGGA AAGGGTGGGG
CCGGTGTGCC GGCCGGATCG CGTCGATACG TGGTTTTCCG GCGGACGCGA TGACCGCGCG
TTGAAGCGGG GCGCGCCGCG ACTGCATACG CGCACGCGGC CGGACGCATG GAAGGAATGG
GCGGCGGCCG CGCATCAACC GGCGGGCAGC GGGCGCGGCC AGATGTTCGA CCATTTCTAT
TTCAGCCTTC AGGCGGCCGT CGCGGGGCTG GGTGTTGCGA TCGGTCCGTG GCATCTCGTT
CGCGACGATC TCGAAAGCGA GGTGCTGGTC GCGCCGATGG GTTTCGTCCA AGACGGCTCG
CACTATTGCC TGCTGACGCC GGAGCCGGTG AAGGACGGAA GTGCGCAGTC GGCGCTGCTC
GACTGGCTGA GGACGATGGC CTGA
|
|---|
| Protein sequence | MISDHDGEFG SQNVRAALPS LMALRCFEAA ARHEHFSRAA DELHLTHGAV SRAVRLLEDD
LGVALFERRS RRVFLTDAGR KLAQAVHDGL HLMRQAAHEL RTDAARAQRW VLSCEPTLLM
RWLIPRWPDF QATYPRVDIH LAAAGGPFSF DHGIDIAIRR NDFAWPAGYH AERLFTERVG
PVCRPDRVDT WFSGGRDDRA LKRGAPRLHT RTRPDAWKEW AAAAHQPAGS GRGQMFDHFY
FSLQAAVAGL GVAIGPWHLV RDDLESEVLV APMGFVQDGS HYCLLTPEPV KDGSAQSALL
DWLRTMA
|
|---|
| |