| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5678 |
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| Symbol | |
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| ID | 4314568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 118367 |
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| End bp | 119485 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638153520 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_777559 |
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| Protein GI | 115360422 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.336046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCGAT GGGCTTGCGT TTTTCTGCTC GTCGGGTGTG CGGCCTGCTC GCGCAACGAT
GCGCTGCCCC GCAACATGTC GCTGACTGCC TTCAACCCTC ATCGCGCCGC ATTCGAGTGC
AAGCATGAAG CCGACGTCGT TCCGCCGACC GATCAGGACG CGGATCGATG GAACCGGCAA
GCGATGGCGC TCACCAGTTC GCTGCTGTGG CCGAACCAGC GCGACTACAA GGGCGCTGTC
GATCTATGGA CGAAGGCCGC CGAGCGCAAG CACTGGAAGG CGATGTTGAA TCTGGCGAAT
GCGTACGCTC AGGGCGATGG CGTGGATCGA GATTCGGAAC GTGCCGTGCA GATTGTCGAG
CAGGCAATGA AACTCGGCGT ACCTGCGGCC TATGACCTGA TGGGCACGTA TTACATGAAC
GGGACGGGCG TGAAGCAGGA CGCGAGCCGC GCGTATGGGT TCCGGCAACT TGCTGCCGAT
ATGGGCAACC CGAATGCGAT GGCATATCTG GGCGGCAAGA TGGATGCCGT GTATGACGAT
CCCAAAGCGG GATTCTGGGG TAATCGCAAG ATTGCGCTTC AGATGCTCGA GTGTGGATTT
GCGCAGGGGA ATGGAGATGC AGCGTATGCG CTCGGGACAA CACTCGTTGG GTCCGACAAG
TCGCTAGGCG AAGACAGCGA ACGCGCCCTC AGAATTCTGC ATGACGGGGT GAAGTACGGC
AGCGCTAGGA GTGCAGCGTA TTTGTTCGGC GCGTTCGATG ATGGTGATCC GGTGGCCGGT
AACGCAAAGG ATCGCGCCCG TGCCGAGCGC TACATCATTC TCGCCGACCG TCTCGAGCGC
GATCCGGACC TTCGTCTGCC GAACCTGGAC AAGGTATTGC CGCTGCCGCC GGCCAGACTG
CCGAAGTGGA ATGGCGACAA GAAGACGTTG ATCGATGCGG CTAAGGCTGT GATATCGGTG
CCCGTGCCGC CTTCCAAACC CGCCATGCAT CCGGTCTCGC TGCGTACCGG TCGTGCGCAT
GTGCCCGATG GCTACATGTT GCCGGAGAAG CCGCACGTCA CAGTGCCTCC GGGGCACACG
CGCGTGCCCG GTGACGGGGC ATCTGGCAGG CCAGCATGA
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| Protein sequence | MIRWACVFLL VGCAACSRND ALPRNMSLTA FNPHRAAFEC KHEADVVPPT DQDADRWNRQ
AMALTSSLLW PNQRDYKGAV DLWTKAAERK HWKAMLNLAN AYAQGDGVDR DSERAVQIVE
QAMKLGVPAA YDLMGTYYMN GTGVKQDASR AYGFRQLAAD MGNPNAMAYL GGKMDAVYDD
PKAGFWGNRK IALQMLECGF AQGNGDAAYA LGTTLVGSDK SLGEDSERAL RILHDGVKYG
SARSAAYLFG AFDDGDPVAG NAKDRARAER YIILADRLER DPDLRLPNLD KVLPLPPARL
PKWNGDKKTL IDAAKAVISV PVPPSKPAMH PVSLRTGRAH VPDGYMLPEK PHVTVPPGHT
RVPGDGASGR PA
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