| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5674 |
|---|
| Symbol | |
|---|
| ID | 4314564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 115444 |
|---|
| End bp | 115881 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638153516 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_777555 |
|---|
| Protein GI | 115360418 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.171739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.201016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC CTACCCATAC CCGTATCCGC ATGTTCAATA CGAAGGATAC CTACCCGAAT
CAGACGCTCG ACAACGACCT GTGCCAGGCT GTGCGCGCCG GCAACACCGT CTACGTGCGC
GGCCAGGTCG GCACCGATTT TGACGGCAAC CTGGTCGGCC TCGGCGATCC GCGCGCCCAG
GCCGAGCAGG CGATGAAGAA CGTGAAGCAA CTGCTCGAGG AAGCCGGCAG CGACATCACG
CATATCGTGA AGACGACGAC CTACCTGATC GACCCGCGCT ATCGCGAGCC GGTGTACCAG
GAAGTCGGTA AGTGGCTGAA GGGCGTCTAT CCGATCTCGA CGGGGCTCGT CGTCTCGGCG
CTCGGCCAGC CGCAGTGGCT GATGGAGATC GACGTGATCG CGGTGATCCC GGACAACTGG
CAGCCGAACC GCGCATAG
|
|---|
| Protein sequence | MSQPTHTRIR MFNTKDTYPN QTLDNDLCQA VRAGNTVYVR GQVGTDFDGN LVGLGDPRAQ
AEQAMKNVKQ LLEEAGSDIT HIVKTTTYLI DPRYREPVYQ EVGKWLKGVY PISTGLVVSA
LGQPQWLMEI DVIAVIPDNW QPNRA
|
|---|
| |