Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5673 |
Symbol | |
ID | 4314563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 114758 |
End bp | 115435 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638153515 |
Product | hypothetical protein |
Protein accession | YP_777554 |
Protein GI | 115360417 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.396491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.198047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCT CCATCGTCGG GCGCTGCCCG GAAACGGGCC AGCTCGGAAT CGCGATCAGC TCGTCGAGCA TCGCGGTGGG GGCGCGCTGC CCGTGGGTGC GGGCGGGCGT CGGCGCGGTC GCGACGCAGA ACATCACGCT GCCGGCGCTC GGCCCGCAGA TTCTCGACCT GATCGAGCAC CAGCAGCTCG CGCCCGCCGC CGCGCTCGAC CGCGCGCTCA GCGCGAACGG CTGGAGCCAG TACCGGCAGG TCACGGTGAT CGACGGGCAA GGGCAGACGG CGTGCTTCAC CGGAAAGGAG GCGCTCGGCA CGCACCATGC GGTGCGGGGC GAGCAATGCG TGGCAGCCGG CAATCTGCTG TCCGCGCCGG CCGTGATCGA GGCGATGGCG CGCGCGTTCG AGCAGGCGCC CGGGCTGCTG GCCGATCGCC TGCTGGCCGC GATGCACGCG GCGATGGCGG CGGGCGGCGA GGCGGGGCCG GTGCATTCGG CCGCGCTGAA GGTGGCCGGC GACGTGACCT GGCCGATCGT CGACCTGCGC GTCGACTGGG CCGACGCCGA TCCGATCGGG CAGCTGGACA CACTGTGGCA GGCCTATCGC CCGCAGATGC AGGATTACCA GACGCGCGCG CTGAACCCGA CCGCCGCGCC GAGCTACGGA GTGCCCGGCG ATGAGTGA
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Protein sequence | MTFSIVGRCP ETGQLGIAIS SSSIAVGARC PWVRAGVGAV ATQNITLPAL GPQILDLIEH QQLAPAAALD RALSANGWSQ YRQVTVIDGQ GQTACFTGKE ALGTHHAVRG EQCVAAGNLL SAPAVIEAMA RAFEQAPGLL ADRLLAAMHA AMAAGGEAGP VHSAALKVAG DVTWPIVDLR VDWADADPIG QLDTLWQAYR PQMQDYQTRA LNPTAAPSYG VPGDE
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