Gene Bamb_5673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5673 
Symbol 
ID4314563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp114758 
End bp115435 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID638153515 
Producthypothetical protein 
Protein accessionYP_777554 
Protein GI115360417 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.396491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCT CCATCGTCGG GCGCTGCCCG GAAACGGGCC AGCTCGGAAT CGCGATCAGC 
TCGTCGAGCA TCGCGGTGGG GGCGCGCTGC CCGTGGGTGC GGGCGGGCGT CGGCGCGGTC
GCGACGCAGA ACATCACGCT GCCGGCGCTC GGCCCGCAGA TTCTCGACCT GATCGAGCAC
CAGCAGCTCG CGCCCGCCGC CGCGCTCGAC CGCGCGCTCA GCGCGAACGG CTGGAGCCAG
TACCGGCAGG TCACGGTGAT CGACGGGCAA GGGCAGACGG CGTGCTTCAC CGGAAAGGAG
GCGCTCGGCA CGCACCATGC GGTGCGGGGC GAGCAATGCG TGGCAGCCGG CAATCTGCTG
TCCGCGCCGG CCGTGATCGA GGCGATGGCG CGCGCGTTCG AGCAGGCGCC CGGGCTGCTG
GCCGATCGCC TGCTGGCCGC GATGCACGCG GCGATGGCGG CGGGCGGCGA GGCGGGGCCG
GTGCATTCGG CCGCGCTGAA GGTGGCCGGC GACGTGACCT GGCCGATCGT CGACCTGCGC
GTCGACTGGG CCGACGCCGA TCCGATCGGG CAGCTGGACA CACTGTGGCA GGCCTATCGC
CCGCAGATGC AGGATTACCA GACGCGCGCG CTGAACCCGA CCGCCGCGCC GAGCTACGGA
GTGCCCGGCG ATGAGTGA
 
Protein sequence
MTFSIVGRCP ETGQLGIAIS SSSIAVGARC PWVRAGVGAV ATQNITLPAL GPQILDLIEH 
QQLAPAAALD RALSANGWSQ YRQVTVIDGQ GQTACFTGKE ALGTHHAVRG EQCVAAGNLL
SAPAVIEAMA RAFEQAPGLL ADRLLAAMHA AMAAGGEAGP VHSAALKVAG DVTWPIVDLR
VDWADADPIG QLDTLWQAYR PQMQDYQTRA LNPTAAPSYG VPGDE