Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5662 |
Symbol | |
ID | 4314552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 99129 |
End bp | 100553 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638153504 |
Product | GntR family transcriptional regulator |
Protein accession | YP_777543 |
Protein GI | 115360406 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.468514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCT ACGAGAAATT CGCGAACGAC ATAGAGAGAC TCATCCGGCA ACGCGTGTAT CGACATGGCG ATCGTGTGCC GTCGGTACGG CAGGCGAGCC AGCAGCACCG GATCAGCATC ACGACCGTGC TGCATGCATA TCTGCTGCTC GAAAGCCGCG GGCTGCTGGA GAGCCGCCCG CAGTCGGGTT ACTTCGTGAA CCTGCGTCGC GACGACAACC ACGCGCCGGT GCGCGAGCTG CGGCCGTCGA AGCCGATCGC GATCTCGTCG TCGGTCGACA TGAGCCGGCT CGTGCTGTCG ACGCTGCGCG CGATCGGCAC CGACGACGCG GTGCCGCTGG GTTCGCCGTA TCCGGACCCG AGCCTGTTTC CGTTCGAGAA ACTGAACCGC TACGCCTATG CAGCCGGCCG CGACAAGTCG TTGTGGGGCG TGACGGACGG GCTGCCGCCG GGCCATCCGC GGCTGATCCG GCAGATCGCG CGACGCTACC TGGAAAACGG GATGTCGGTC GATCCGAACG AGATCATCGT GACGGTCGGC GCGACTGAGG CGATCAATCT GTGCCTGCAG GCGGTTGCAA AACCGGGTGA CACGATCGCG GTGGAGTCGC CGACGTTCTA CGCGATGCTG CACGCGATCG AACGGATGGG GATGAAGGCG ATCGAGGTCG CGACGCACCC GGAGTACGGG ATCGACATCG CGGCGCTGGC GGCCATTGCA AAGTCGCAGC CGATCGCCGC GTGCATGGTG ATGCCGAATT TCCAGAACCC GCTCGGCTTT CAGATGCCCG ACGAGCGCAA GCGCGAACTG GTTGAATACG CAACGAAAGC CGACATGCCG ATCATCGAGA ACGGCGTGTA CAACGAATTG TATTTCGGCA ATGCCCATCC GAGCGCGCTG AAGGCGTTCG ACCGCACCGG GATCGTGCTG CATTGCGCAT CGTTCTCGAA GAGCCTGACG GCCGCCTACC GGATCGGCTG GGCATTGCCG GGCCGCTATC GCGAACAGGT CGAGAAGCTG AAGTTCCTGA ACACGCTGGC GACGCCGTCG CTGCCGCAAC TCGCGATCGC CGAGTTTCTC GAGCGAGACG GCTACGAGCA TCATCTGCGG CGGATTCGCA AGGCATATGC GCAGCAGGCG AACCTGATGC GCGCGATGGT GTCGCGGTTC TTTCCGGAAG GTACGCGCAT CTCGAGCCCG GCGGGCGGGT ACGTGCTGTG GGTCGAGCTG CCGGCACAGG TCGACGCGAT GCGCCTGTAC CAGCTCGCGC TGGAGCAGGG CATCACGATC GGGCCCGGCT ACATGTTCTC GATCGCGGAC ACCTACCGCA ATTTCATCCG GCTGAACTAC AGCAGCCCGT GGTCGCCGGA GATCGAGCGG GCGATCGTCA CGGTCGGTAA GCTCGCGGTG GGCTGCATGG ATTGA
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Protein sequence | MKLYEKFAND IERLIRQRVY RHGDRVPSVR QASQQHRISI TTVLHAYLLL ESRGLLESRP QSGYFVNLRR DDNHAPVREL RPSKPIAISS SVDMSRLVLS TLRAIGTDDA VPLGSPYPDP SLFPFEKLNR YAYAAGRDKS LWGVTDGLPP GHPRLIRQIA RRYLENGMSV DPNEIIVTVG ATEAINLCLQ AVAKPGDTIA VESPTFYAML HAIERMGMKA IEVATHPEYG IDIAALAAIA KSQPIAACMV MPNFQNPLGF QMPDERKREL VEYATKADMP IIENGVYNEL YFGNAHPSAL KAFDRTGIVL HCASFSKSLT AAYRIGWALP GRYREQVEKL KFLNTLATPS LPQLAIAEFL ERDGYEHHLR RIRKAYAQQA NLMRAMVSRF FPEGTRISSP AGGYVLWVEL PAQVDAMRLY QLALEQGITI GPGYMFSIAD TYRNFIRLNY SSPWSPEIER AIVTVGKLAV GCMD
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