Gene Bamb_5662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5662 
Symbol 
ID4314552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp99129 
End bp100553 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID638153504 
ProductGntR family transcriptional regulator 
Protein accessionYP_777543 
Protein GI115360406 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.468514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT ACGAGAAATT CGCGAACGAC ATAGAGAGAC TCATCCGGCA ACGCGTGTAT 
CGACATGGCG ATCGTGTGCC GTCGGTACGG CAGGCGAGCC AGCAGCACCG GATCAGCATC
ACGACCGTGC TGCATGCATA TCTGCTGCTC GAAAGCCGCG GGCTGCTGGA GAGCCGCCCG
CAGTCGGGTT ACTTCGTGAA CCTGCGTCGC GACGACAACC ACGCGCCGGT GCGCGAGCTG
CGGCCGTCGA AGCCGATCGC GATCTCGTCG TCGGTCGACA TGAGCCGGCT CGTGCTGTCG
ACGCTGCGCG CGATCGGCAC CGACGACGCG GTGCCGCTGG GTTCGCCGTA TCCGGACCCG
AGCCTGTTTC CGTTCGAGAA ACTGAACCGC TACGCCTATG CAGCCGGCCG CGACAAGTCG
TTGTGGGGCG TGACGGACGG GCTGCCGCCG GGCCATCCGC GGCTGATCCG GCAGATCGCG
CGACGCTACC TGGAAAACGG GATGTCGGTC GATCCGAACG AGATCATCGT GACGGTCGGC
GCGACTGAGG CGATCAATCT GTGCCTGCAG GCGGTTGCAA AACCGGGTGA CACGATCGCG
GTGGAGTCGC CGACGTTCTA CGCGATGCTG CACGCGATCG AACGGATGGG GATGAAGGCG
ATCGAGGTCG CGACGCACCC GGAGTACGGG ATCGACATCG CGGCGCTGGC GGCCATTGCA
AAGTCGCAGC CGATCGCCGC GTGCATGGTG ATGCCGAATT TCCAGAACCC GCTCGGCTTT
CAGATGCCCG ACGAGCGCAA GCGCGAACTG GTTGAATACG CAACGAAAGC CGACATGCCG
ATCATCGAGA ACGGCGTGTA CAACGAATTG TATTTCGGCA ATGCCCATCC GAGCGCGCTG
AAGGCGTTCG ACCGCACCGG GATCGTGCTG CATTGCGCAT CGTTCTCGAA GAGCCTGACG
GCCGCCTACC GGATCGGCTG GGCATTGCCG GGCCGCTATC GCGAACAGGT CGAGAAGCTG
AAGTTCCTGA ACACGCTGGC GACGCCGTCG CTGCCGCAAC TCGCGATCGC CGAGTTTCTC
GAGCGAGACG GCTACGAGCA TCATCTGCGG CGGATTCGCA AGGCATATGC GCAGCAGGCG
AACCTGATGC GCGCGATGGT GTCGCGGTTC TTTCCGGAAG GTACGCGCAT CTCGAGCCCG
GCGGGCGGGT ACGTGCTGTG GGTCGAGCTG CCGGCACAGG TCGACGCGAT GCGCCTGTAC
CAGCTCGCGC TGGAGCAGGG CATCACGATC GGGCCCGGCT ACATGTTCTC GATCGCGGAC
ACCTACCGCA ATTTCATCCG GCTGAACTAC AGCAGCCCGT GGTCGCCGGA GATCGAGCGG
GCGATCGTCA CGGTCGGTAA GCTCGCGGTG GGCTGCATGG ATTGA
 
Protein sequence
MKLYEKFAND IERLIRQRVY RHGDRVPSVR QASQQHRISI TTVLHAYLLL ESRGLLESRP 
QSGYFVNLRR DDNHAPVREL RPSKPIAISS SVDMSRLVLS TLRAIGTDDA VPLGSPYPDP
SLFPFEKLNR YAYAAGRDKS LWGVTDGLPP GHPRLIRQIA RRYLENGMSV DPNEIIVTVG
ATEAINLCLQ AVAKPGDTIA VESPTFYAML HAIERMGMKA IEVATHPEYG IDIAALAAIA
KSQPIAACMV MPNFQNPLGF QMPDERKREL VEYATKADMP IIENGVYNEL YFGNAHPSAL
KAFDRTGIVL HCASFSKSLT AAYRIGWALP GRYREQVEKL KFLNTLATPS LPQLAIAEFL
ERDGYEHHLR RIRKAYAQQA NLMRAMVSRF FPEGTRISSP AGGYVLWVEL PAQVDAMRLY
QLALEQGITI GPGYMFSIAD TYRNFIRLNY SSPWSPEIER AIVTVGKLAV GCMD