| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5658 |
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| Symbol | |
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| ID | 4314548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 93883 |
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| End bp | 95469 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153500 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_777539 |
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| Protein GI | 115360402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.568926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG ACGACGCCAT TTCCGAATTG CCTCCGCCGC TCGGCCCCGC CGATGCACGC
GATCTGCTGC ATCGCTTCGC CGAGTTCCGC TTCGAAACCG TCGTCGGTGC AATCACCGAC
TACGCGGTGT TCATGCTCGA TCCGCAAGGC AACGTCGCGA CCTGGAACGC GGGCGCGGAG
CGCATCAAGG GCTATCGCAC CACCGAGATC ATCGGCCACC ATTTCTCGCG CTTCTATCCG
GCCGACGCGG TCGCCGCGGG CCGGCCGGCG CTCGGGCTCC GCGAAGCGAG CGTGCACGGC
CGTTTCGAGG ACGAAGGCTG GCGCGTGCGG AAAGACGGTT CGCTGTTCTG GGCCAGCGTG
ACGATCACGG CCGTGCGCGA TCATGGGGGC CAGCTGGCCG GCTTCATCAA GATCACGCGC
GACATGACCG AGCGCAAGCG GCTCGCCGAA CTGGAAATGT CGACGCACCG GCTCAGCGTG
TTCATCGCGA TGCTCGCGCA CGAACTGCGC AACCATCTCG CGCCGCTGCG CCACTCCGTC
AGCGTGCTGC AAACGCTGCC CGATCCGGCG CCGATGCTCG CGCAATGCCG CGACGCGGTG
CACCGTCAGG TCGGACAACT GACGCGGCTC GTCGACGATC TGCTCGACGT CGGGCGCATC
ACGGCCGGCA AGGTCGAGCT GGACAACGCG CCGGTGACCG TGCGCGACGT CGTGTGCCGC
GGCGTGGAGA GCATCCAGCC GAAGCTGGCC GCGCGCCAGC AGCATCTTCG CGTCGAACTG
CCGCCCGAGC CGGTGGTGGT GCGCGGCGAC GCCGCGCGGC TCGTGCAGGT GCTGCACAAC
CTGCTCGACA ACGCGTCCAA GTTCTCGCCG CCCGGCGCGC GCATCGACGT CTCCGCCGAC
CGCGAGGGCT CGACCGTCGC GATTCGCGTG ACCGATCACG GCGTCGGCAT CGCGGCGGGT
TCGCTCGAGA CGATCTTCGA CCTGTTCGAC CAGGACGGCG TGCCGGGCCG GCGCCCGTCC
GACGGCTTCG GGCTGGGCCT CGCGATCTGC CGGTCGTTCA TCGAGCTGCA TGGCGGCAGG
ATTTCCGCGG AAAGCGAAGG CCCCGGCCAC GGAGCGACGT TCACGGTACG GTTGCCCGTC
GAGCACCACG TGGAAACGGC ACGGACGGAA GCGCCCGCGC CGCGCGCCGG GAAGCCGGCC
GCCGCGCCGC TGAACATCGT CGTCGTCGAC GACAACCGCG ACTCGGCCGA CACGCTCGCC
GTGCTGCTGC AGTTGAAGGG GCACGTGCCG CGCGTCGCGT ACAACGCGAG CGATGCGCTC
GCGCTCGTGC GCGAAGCCGT TCCGCATCTG ATGCTGATCG ACCTGTCGAT GCCCGACGTC
GACGGCTACA CGCTGCTGCA CGAACTGCGC GCGATCGACA CGCCGGGCGG CATGATCTGT
GTCGCGCTGT CCGGTCATGC CAGCTCATCG GATCTCGCGC GCACGGCGCG CGAGGGCTTC
GACGATCACC TCGTGAAACC CCTCGAGATG GCCGTGCTCG ACGCGCTGCT GCAGCGTGTC
GCGCGCACGG TGCATGGCAC GCCATGA
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| Protein sequence | MNKDDAISEL PPPLGPADAR DLLHRFAEFR FETVVGAITD YAVFMLDPQG NVATWNAGAE
RIKGYRTTEI IGHHFSRFYP ADAVAAGRPA LGLREASVHG RFEDEGWRVR KDGSLFWASV
TITAVRDHGG QLAGFIKITR DMTERKRLAE LEMSTHRLSV FIAMLAHELR NHLAPLRHSV
SVLQTLPDPA PMLAQCRDAV HRQVGQLTRL VDDLLDVGRI TAGKVELDNA PVTVRDVVCR
GVESIQPKLA ARQQHLRVEL PPEPVVVRGD AARLVQVLHN LLDNASKFSP PGARIDVSAD
REGSTVAIRV TDHGVGIAAG SLETIFDLFD QDGVPGRRPS DGFGLGLAIC RSFIELHGGR
ISAESEGPGH GATFTVRLPV EHHVETARTE APAPRAGKPA AAPLNIVVVD DNRDSADTLA
VLLQLKGHVP RVAYNASDAL ALVREAVPHL MLIDLSMPDV DGYTLLHELR AIDTPGGMIC
VALSGHASSS DLARTAREGF DDHLVKPLEM AVLDALLQRV ARTVHGTP
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