| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5651 |
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| Symbol | |
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| ID | 4314541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 86021 |
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| End bp | 87223 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638153493 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_777532 |
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| Protein GI | 115360395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.252333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CGTGGGATCG TGCACGCCGG ATCCTGTGCG TGCGGCTCGA CAGCCTCGGC
GACGTGCTGA TGACGACGCC CGCGCTGCGC GCGCTGAAGG AGAGCGGGCA GGGCCGCCGG
CTCACGCTGC TGACTTCGCG CACCGGCGCC GCGCTCGCGC CGCATCTGCC GATGGTCGAC
GACGTGTGGA CGTATGACGC GCCCTGGGTC AAGCATCCGG AGGCCCGCGG CGATCCGGTC
GTCGATCTCG ACATGATCGA CCGGCTGTTG GCCGGCCACT TCGACGCGGC CGTGATCTTC
ACCGTGTATA GCCAGAGCCC GCTGCCGGCC GCGATGATGT GCTGGCTCGC GGGCATCCCA
CTACGGCTCG CGCATTGTCG CGAGAATCCG TATGAACTAT TGACCGACCG CGTGCCGGAA
CTCGAGCCGG AATCGTTCGT GCGCCACGAG GTCGCGCGCC AGCTCGCGCT GGTGCGCTCG
ATCGGCGCGA AGACCTCCGA CTGGCGGATG GCGTTCGAGC CCGGCGACGC GGCGCGCGAT
GCGCTGCACG CCCGGCTGCG CGCCGCGCTG GAGCGCATCG GCGGCCCGCG CCGGCCGGGC
TCGGCGCGCG CGCGCTGGCT CGTCGTGCAT CCCGGCGCGA GCGCGGCGTC GCGGCGCTGG
CCGGCCGAGC GCTTCGGCGC CGCGGCCGCG CGGCTCGCGC CGCTGTTCGA CGGGATCGCG
GTGACGGGCA GCGCGGACGA GCGGCCGCTC GTCGAGGCCG TGTGCGAACG CGCGGGGCCG
CGCGCGGTGC CGCTCGCCGG CGCGCTGCCG CTCGGCGAGC TCGGCGCGCT GATCGAGACG
GCCGACCTGC TGCTGTCGAA CAACAGCGGC CCCGTGCATC TCGCGGCCGC GCTCGGCACG
CCGGTCGTCG ATCTGTACGC ACTGACCAAC CCCCAGCACA CGCCGTGGCG TGTGCCGCAT
CGCGCGTTGA ACGTCGATGT GCCGTGTCGC AACTGCTATC GCAGCGTATG CAACCAGCCG
GGGCATCCGT GCCTGCTCGG CGTGAGCGTC GACGACGTCG TCGCGGCGAC GCACGCGCTG
CTGCGCGGCA GCGAGCGCCA TGCGCAACGC GCGGCCGCGC GCGCCGCCGT CCGCGGCGTC
GAGCCGGTCG CCGCGAACGC ATCGAACGTG ATTCCCTTCG CGCACGTCAT CACCAGGAGC
TGA
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| Protein sequence | MSAAWDRARR ILCVRLDSLG DVLMTTPALR ALKESGQGRR LTLLTSRTGA ALAPHLPMVD
DVWTYDAPWV KHPEARGDPV VDLDMIDRLL AGHFDAAVIF TVYSQSPLPA AMMCWLAGIP
LRLAHCRENP YELLTDRVPE LEPESFVRHE VARQLALVRS IGAKTSDWRM AFEPGDAARD
ALHARLRAAL ERIGGPRRPG SARARWLVVH PGASAASRRW PAERFGAAAA RLAPLFDGIA
VTGSADERPL VEAVCERAGP RAVPLAGALP LGELGALIET ADLLLSNNSG PVHLAAALGT
PVVDLYALTN PQHTPWRVPH RALNVDVPCR NCYRSVCNQP GHPCLLGVSV DDVVAATHAL
LRGSERHAQR AAARAAVRGV EPVAANASNV IPFAHVITRS
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