| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5642 |
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| Symbol | |
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| ID | 4314509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 74350 |
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| End bp | 76656 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638153484 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_777523 |
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| Protein GI | 115360386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.203801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA TTGCACGGCC CCAAGCCGGA AATTACGCAA CCGCCGTAAT GCTCGTCGCG
ACCGCGACCG TGCTGCAAAC GCTGGCGATC CGTTTTGGCG GCGTGAACCT GCCGCTGATC
CTGTATTACC CGTTGCTCGC CGGCGCCGCG TGGGCGACGT CGTTCCTGTT CGGAATCCTG
TCGACCGTGC TCAGCGGGCT GCTGGTCTGG ACGCTGTTCC TGTCCGATGC ATCCGCGTAT
ACCGGGCCGC TGCCCGACCG CCTCGTGCGG CTCGGCATCT TCATGCTGGT CGGCGTGCTG
GTGTGTGCGA TCGCGGCGAG GCTGCGGCAC GCGCGGGTCA CGAACCGTCT GGCATACCAG
AACGAGGCCG CCGCGCGGCG GCAGCTCGAC GCCGTGCTGC AGGCGTTGCC GGACGGCGTG
ATCGCGACCG ATGCGCAAGG CCGCATAACC TACGTGAACG CGGCGGCGAT CGCGCTGGCC
GGCGGCGCGC TCGAGGATGC GACGGGCCGC CCTGTGCGCG ACGTGCTGCA CGTGTTCGAC
CGCGACGACC GGCCCGTGCA GCCGACGCCG CTCGAGCGCG CGCTCGCCGG CGCGCATGCG
CTGTCCGACC GGCACTGGCT GCACGGCGCC GACGGCAGCC CGCCGGTACC GATCGTCGAG
GCCGCGTCGC CGATCGTCGA CGCGCACGGC AGCCTCGACG GCGCGGTGCT GTTGCTGCGC
GATGCGGGCA CGGAGCGCGC GTTGGCGGAG GTGTCGCGCC TGCAGCGCGC GGTGGTCGAT
GCGTCGCCGG ACGCGATCGT CGGGATCGAC CGCGAGGGCC GCATCGTCAG CTGGAACCCG
GCCGCGCAGC GGATCTTCGG GTATGACGAA GCCGACGCGC GCGGGCGCCC GCTCGAAACG
CTGGTCGCGA TGCGCTGGCT GCGGCGCAAC CCGCTCGCCG ATTCGTTCGA CGCGATGCGC
GAAGCGGTCG GCCCGCTCGA ATTGCTGTGC GTGCGCCGCG ACGGCCGGCG TTTTCGCGCA
ACGGTGTCCG CGGGCCCGGT GCGCGGCGAC GCGCGCAACT GCGTCGCGCT GTCGCTGACG
CTGCGCGAAA CGGGCGCGCA GCGCCGGCGC GACTTGCGCA CGCAACGCTC GTTGCAAGGC
GCACGCGACG CGCGCGACCG GGCCGATACG TCGAATCGTC TGAAGGACGA ATTGCTTGCG
ACCGTGTCGC ACGAACTGCG CACGCCGCTG AACGTGATCT ACGGCTGGAT CGAGGTGCTG
CGCAATACGC GCGACGATGC GCTCGAGCAG CAGGCGATCG ATGCGATCGA CCGCAGCGCG
CGTTCGCTGA CGCGCATGGT GGGCGACATC CTCGATGCGT CGTCGCTCGC GACCGGCAAG
TTGCGGATCG ATCCGATGCC GGTCGACGTG GTGCGGCTCT TCTCCGATAC GGTCGGTGCG
TTCCAGACGG CCGCGTCGTC GGCCGGCATC GTGCTCGAAT TCGAGTGTGC GGCGAGCGCG
TGCGTGGTGT CGGGCGACGC GGAACGCCTG CGGCAGATGC TCGCGAACCT CGTGTCGAAC
GCGCTGAAAT TCACGCCGGG CGGTGGCGCG GTGACGGTCA CGCTGTCGCG TGACGACGCG
CACGCGGTGC TGGTCGTCGC GGACACCGGG CAGGGCATTC CGCCCGCGTT CATTCCCCAT
GTATTCGACA TGTTCCGCCG CGCGGACGAT TCGCCCGCGT CGCCGCGGCG CGGGCTCGGG
CTCGGCCTGT CGATCGTGCG CCACATCGCC GGGCTGCACG GCGGCCAGGT GCGGGTCGAA
AGCGCGGGCC GCAATCGCGG CGCGACCTTC ACGGTGACGC TGCCAGCCGG CTGGCAGCCG
ACCGGCGCGA TGGCGTGGGG CATCGCGCAG GCCGATGGCC GGCGCGACCG GCTGATGCTC
GATGCGCAGC GCATCCTGAT CGTCGACGAC GACGCGACCA CGCGCGCGAG CCTGACGGCC
GCGCTGACGA CGCTCGGCGC GGCGGTGTCG ATCGCGTCGT CGGGCCGCGA AGCGCTCGCG
GTGGTCGCCA ACATTCAGCC AACCGTCGTG CTGTCCGATC TCGCGATGCC CGACGGCGAC
GGCTTCTGGC TGCTCGACGC GTTGCGGCAC GGCCATGCGC ACGGCGCGAC GCCGCGCGAC
CTGCGCGTGC TGGCCGTCAC GGCGCACGCG GGCCCCGCCG ACGAGCGGCG CGCGCTCGAA
GCGGGGTTCG ACGGCTTTCT GTGCAAGCCG GTCGACGTGC GGGAACTGGC GCACAAGATC
GCGGACGTGA CGCAGCGCGA GCGGTAA
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| Protein sequence | MSEIARPQAG NYATAVMLVA TATVLQTLAI RFGGVNLPLI LYYPLLAGAA WATSFLFGIL
STVLSGLLVW TLFLSDASAY TGPLPDRLVR LGIFMLVGVL VCAIAARLRH ARVTNRLAYQ
NEAAARRQLD AVLQALPDGV IATDAQGRIT YVNAAAIALA GGALEDATGR PVRDVLHVFD
RDDRPVQPTP LERALAGAHA LSDRHWLHGA DGSPPVPIVE AASPIVDAHG SLDGAVLLLR
DAGTERALAE VSRLQRAVVD ASPDAIVGID REGRIVSWNP AAQRIFGYDE ADARGRPLET
LVAMRWLRRN PLADSFDAMR EAVGPLELLC VRRDGRRFRA TVSAGPVRGD ARNCVALSLT
LRETGAQRRR DLRTQRSLQG ARDARDRADT SNRLKDELLA TVSHELRTPL NVIYGWIEVL
RNTRDDALEQ QAIDAIDRSA RSLTRMVGDI LDASSLATGK LRIDPMPVDV VRLFSDTVGA
FQTAASSAGI VLEFECAASA CVVSGDAERL RQMLANLVSN ALKFTPGGGA VTVTLSRDDA
HAVLVVADTG QGIPPAFIPH VFDMFRRADD SPASPRRGLG LGLSIVRHIA GLHGGQVRVE
SAGRNRGATF TVTLPAGWQP TGAMAWGIAQ ADGRRDRLML DAQRILIVDD DATTRASLTA
ALTTLGAAVS IASSGREALA VVANIQPTVV LSDLAMPDGD GFWLLDALRH GHAHGATPRD
LRVLAVTAHA GPADERRALE AGFDGFLCKP VDVRELAHKI ADVTQRER
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