Gene Bamb_5639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5639 
Symbol 
ID4314506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp71313 
End bp71717 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID638153481 
Producttransport-associated 
Protein accessionYP_777520 
Protein GI115360383 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.149696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAT TCCCGCTGCA AGCCCGCGCA CCGCGCTTTC GCCGTCGTCC CGCGACGCGC 
CTCGGCATGG CGGTCGCGAT CGCCGCGGCC GTCGCGTGCA CGGCCGTCGC GCCGAACGTG
TTCGCCGCCG GCGACGACGG CGCATCGTCA TCCATGTCGT CGTCGACGCA TACGAGCACC
GGCGCGAAGA TCCGCGACGC GACCATCACG ACCAAGGCCA AGGCCGAACT GGTCGGCACG
AGCGGCCTGT CGGCCGGCGA CATTCACGTG AAGACGCGTC ACGGCATCGT GATGCTCACC
GGCAGCGTGC CGGACGAACA GCAGCGCACG CAGGCGGTGA GTGTCGTCAA GCAGATCGAG
GGCGTGCAGG ACGTGCGCGA CCAGTTGACC ATCCGCCCGA AATAA
 
Protein sequence
MKVFPLQARA PRFRRRPATR LGMAVAIAAA VACTAVAPNV FAAGDDGASS SMSSSTHTST 
GAKIRDATIT TKAKAELVGT SGLSAGDIHV KTRHGIVMLT GSVPDEQQRT QAVSVVKQIE
GVQDVRDQLT IRPK