Gene Bamb_5630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5630 
Symbol 
ID4314497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp63897 
End bp64373 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID638153472 
Productresponse regulator receiver protein 
Protein accessionYP_777511 
Protein GI115360374 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.045392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0327485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCC TCTCCGGCGA CGATCCGGCC GCCGACGACG TGCTGCTGTG GCGCCCATCC 
GATAGCGTGC CGCGCCGGCT GCGCCGCGTG CTGGTCGTCG ACGACTATCG CGACGCGGCC
GATGCGCTGC GATTGCTGCT CCAGGCGCGC GGCTTCGAAT GCCGCGTCGC GGACGATCCG
TTCGCCGTCT GTGATCTCGC GCGCGACTGG CAGCCGTTCG CGATCGTGCT GGACATCGCG
ATGCCGGGCC TCGACGGCCT GCAACTCGCG AAGCGGCTGC GCGGCGACCC GCACACCGCC
GACATGCTGC TTATCGCATG CACCGCATTC GCGTCGCAGA GCGATCGCGA GCGTGCGCGC
GAAGCCGGCT TCGACGCGCA TTGTGCGAAG CCGCTGACGC CGCACCGGCT GCTGCGTTAT
CTGGACGCCG CCTACGGCGG CGCGCGGCAG GACGCGGGCG TTACACGGGG TGTGTAA
 
Protein sequence
MQILSGDDPA ADDVLLWRPS DSVPRRLRRV LVVDDYRDAA DALRLLLQAR GFECRVADDP 
FAVCDLARDW QPFAIVLDIA MPGLDGLQLA KRLRGDPHTA DMLLIACTAF ASQSDRERAR
EAGFDAHCAK PLTPHRLLRY LDAAYGGARQ DAGVTRGV