| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5627 |
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| Symbol | |
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| ID | 4314494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 61170 |
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| End bp | 62063 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153469 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_777508 |
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| Protein GI | 115360371 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0387967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCG AAAACCTCAA CGATCTGCTC GTGTTTCTGG CCGTGGCGCG CGACCGGAGC
TTCACGCGCG CGGCGGCTCG GCTCGGCGTG TCGCAATCGG CGCTGAGCCA GACGGTCCGC
GATCTCGAGA CGCGCCTCGG CGTGCGGCTG CTGACGCGCA CGACGCGCAG CGTGTCGACG
ACCGAAGCGG GCGAGGAACT GTTTCAGGCC GTCGCGCCGC GCATCGACGA GATCGAGATG
AAGCTCGCCG CGGTGGCCGA TTTCCGCGAC AAGCCGGCCG GCGTCGTGCG GATCACGGCC
ACCGAGCATC CGATCGACAC GATCATCTGG CCGAAGCTCA GGCGCGTGCT GCCCGATTAC
CCCGACATCC GCGTCGAGCT GTCGGTCGAC TACGGGCTGG CGAACATCGT CGAGGAGCGC
TACGACATCG GCGTGCGCTA CGGCGACCAG GTCGCGAAGG ACATGATCGC GGTGCGCATC
AGCCCGGACA TCCGGATGAC GATGGTCGCG TCGCCGGCGT ATCTCGACGG CCGCAAGCCG
CCAAAGACGC CGCAGGACCT GCTCGATCAC GACTGCGTGA CGCTGCGGCT CGCGACCGCG
AAGGGCATCT ATGCGTGGGA GCTGAAGAAG GGCAGGAACG AGATCCAGGC GCGCGTGAGC
GGCCGCATCA CGTGCAATAC GCAGCCGCAT ATGGTCCAGG CGGCGCTCGA CGGATTCGGC
ATTGCGTTCG TCACCGAGGA CATCGTGCTC GACCACGTGC GCAGCGGGCA GCTGCGGATC
GTGATGCCGG ACTGGTGCCC GGTGTTTCCC GGCTATCACG CGTACTATCC GAGCCGCCGC
CAAGCCTCGC GCGCATTCTC GATCGTGATC GATGCGTTGC GGCATCGCGC ATAG
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| Protein sequence | MPRENLNDLL VFLAVARDRS FTRAAARLGV SQSALSQTVR DLETRLGVRL LTRTTRSVST
TEAGEELFQA VAPRIDEIEM KLAAVADFRD KPAGVVRITA TEHPIDTIIW PKLRRVLPDY
PDIRVELSVD YGLANIVEER YDIGVRYGDQ VAKDMIAVRI SPDIRMTMVA SPAYLDGRKP
PKTPQDLLDH DCVTLRLATA KGIYAWELKK GRNEIQARVS GRITCNTQPH MVQAALDGFG
IAFVTEDIVL DHVRSGQLRI VMPDWCPVFP GYHAYYPSRR QASRAFSIVI DALRHRA
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