Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5611 |
Symbol | |
ID | 4314606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 47129 |
End bp | 48136 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153453 |
Product | Ku domain-containing protein |
Protein accession | YP_777492 |
Protein GI | 115360355 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.542393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGC GGATGATATG GAAAGGCGCG ATCAGTTTCG GGCTCGTTCA CGTGCCCGTG CAGCTGTTCC CGGCGACACG CACCGTGAAG CCGTCGTTCC GGCTGCTCGA CAAGCGCTCG ATGGATCCGG TCGGCTATCG GCAGATCAAC AAGCGCACCG GCAAGGAGGT CACGCGCGAG GACATCGTGC GCGGCTACGA GTACGAGAAG GAGCGCTACG TTGTACTGAC CGATGAAGAG ATTCGCGCGG CGAACCCCGA ATCGACGCAG ACGGTCGACA TTCTCACGTT CGTCGACGCG GACGCGGTGT CGTTCCTGTA TCTCGACACG CCGTACTACC TCGTGCCGGA CCGCAAGGGC GAGAAGGTCT ATGCGCTGCT GCGCGAGGCA CTGAAGGACA GCGGCAAGAT CGGCATCGCG CTCGTCGTGA TGCGCGACCG CCAGCATCTC GGCGCGCTGA TTCCGGTCGG GCCGCTGCTC GCGCTCGACA CGTTGCGCTG GCAGGAGGAA CTGCGCCCGC TCGACGAACT GTCGGTGCCG ACGGACGACG CAAAGCACGC GGGCGTGACC GCGCGCGAGC TGACGATGGC GAAGAAGCTG ATCGACGACA TGGCGGGCAA GTGGACGCCC GACGAGTATC ACGACACGTT CCGCGACGAC ATCCTCGAAC TGGTCGAGCG CAAGGTGCGC TCGGGCAAGA TCGAGGAAAT CGAGGACCGG CCGGCGCAGA CGGGCCGTGC CGCGACCAAC GTGGTCGACC TCACCGAGCT GCTCAAGCGC AGCCTGAAGG GCGGCGGTGG CGCGCGCGCA TCGGACCTGC GCGACGAACG CGCGGAAGAG GAGGCCGAGA CGTCGTCGCC TGCCGGCGCG CGTCGCAAGG CGGCTGCGAA ATCCGCGTCG AAAGGCGCGG CCGTGAAGAG TCCGGCGAAG CGGCCGGCCG CGAAACGCGC GGCGACGGGC GCACATGCGG CGAAGAAAAC CGCCGTGCGC GGCAAGCACG CCGCATGA
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Protein sequence | MAPRMIWKGA ISFGLVHVPV QLFPATRTVK PSFRLLDKRS MDPVGYRQIN KRTGKEVTRE DIVRGYEYEK ERYVVLTDEE IRAANPESTQ TVDILTFVDA DAVSFLYLDT PYYLVPDRKG EKVYALLREA LKDSGKIGIA LVVMRDRQHL GALIPVGPLL ALDTLRWQEE LRPLDELSVP TDDAKHAGVT ARELTMAKKL IDDMAGKWTP DEYHDTFRDD ILELVERKVR SGKIEEIEDR PAQTGRAATN VVDLTELLKR SLKGGGGARA SDLRDERAEE EAETSSPAGA RRKAAAKSAS KGAAVKSPAK RPAAKRAATG AHAAKKTAVR GKHAA
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