Gene Bamb_5609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5609 
Symbol 
ID4314604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp42975 
End bp44300 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content70% 
IMG OID638153451 
Productsodium/hydrogen exchanger 
Protein accessionYP_777490 
Protein GI115360353 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.872686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA CGCTGTGGTA TCTGATCATC GGCGCGGTGC TGATGGGCAT GGGTGTCGCG 
ACGTCGGCGC TGCGCCGTCT GCCGTGCAGC ACCGCGATGA TCTATCTCGT GCTCGGCGTC
GCGCTCGGTC CGTCCGGCGT CGGGCTTCTG CACCTCGATA TCGAACGCGA CGCGCGGCTG
CTGCGCGAGA TCGTCGAGGT CGCGCTGCTG GTGTCGCTGT TCGCGATCGG GCTGCGGCTG
CGCGTGCCGC TGTCCGACAA GCTGTGGCTC GTGCCATGCC GGCTCGGCCT GCTCGCGATG
ATCGTCACCG TGCCGCTGCT CGCCGGCTGC GCGGTGCTGA CGCTCGGCCT CGGCTGGGGC
CCCGCGCTGC TGCTCGCGGC GATCCTCGCG CCGACCGACC CGGTGCTCGC GCACGACGTG
CAGGTGCACG ATCCCGGCGA CCGCGATCTG GTGCGCTTCG CGCTGTCCGG CGAAGGCGGG
ATGAACGACG GGATCGCGCT GCCGTTCGCG CTCGCGGGCC TCGCGCTGTG CGGCGTGCCC
GATACGCCGC ACGGGCCGCC GCCGTTGTCC GGCACGTTCG CGCTGGCCGT GCTGTGGGGC
ATCGGCGGCG CTGCCGCGAT CGGCGGCCTG CTCGGCGCGG CCACGACCAA GGCGATCGGC
CGGCTGCGCA CCCGCTATGC GCAGGCGCTC GGCTTCGAAG GCTTCTTCGC GCTCGCGCTG
ATCGTGCTGT CGTTCGGCGC CGCGCAGTTC GCGCATACGT TCGGCTTCAT CGCGACGTTC
GCCGCGGGCG TCGCGATGCG CCGCGTCGAG CATCGAGCCA GCGGCGATCG CCCGCCGCGC
GAGGTGATCG GCCAGGTCGA TTCGGAAGAC GTGAGCGCGA CCGAGAAACA TCCGGAGAAA
GTCCACGCGT TCATGGCCGA ATCGGTGCTC GATTTCACGA TCGAGCTCGA GCGGATCGCC
GAGGCGCTCG TGATGACGAT GATCGGCAGC GTACTCGGCA CGCTGTCGGC TCCGCTCGTC
ACGTGGGGCG CGGTTGCGCT GGCGCTGGTG CTGTTCGTCG CCGTGCGGCC GTTCGCGGTG
CTGCTGACGC TCACCGGCTC ACACGCGACG CTTGCGCAGC GGCGGCTGAT GGCCTGGTTC
GGGATACGCG GAATCGGTTC GTTCTACTAC CTTCTGTTCG CGCTCGAGCA CGGGCCATCC
AGCACGGTGC GGCCGCTCGC GGCGCCGGTG CTTGCCGTCG TGGTGGCGTC GGTGATCGCG
CACGGGATCT CCGCGACGCC GCTGATGGAT TGGTATTACC GTCTGCAGCA CCGGCGCGGA
CCCTGA
 
Protein sequence
MHETLWYLII GAVLMGMGVA TSALRRLPCS TAMIYLVLGV ALGPSGVGLL HLDIERDARL 
LREIVEVALL VSLFAIGLRL RVPLSDKLWL VPCRLGLLAM IVTVPLLAGC AVLTLGLGWG
PALLLAAILA PTDPVLAHDV QVHDPGDRDL VRFALSGEGG MNDGIALPFA LAGLALCGVP
DTPHGPPPLS GTFALAVLWG IGGAAAIGGL LGAATTKAIG RLRTRYAQAL GFEGFFALAL
IVLSFGAAQF AHTFGFIATF AAGVAMRRVE HRASGDRPPR EVIGQVDSED VSATEKHPEK
VHAFMAESVL DFTIELERIA EALVMTMIGS VLGTLSAPLV TWGAVALALV LFVAVRPFAV
LLTLTGSHAT LAQRRLMAWF GIRGIGSFYY LLFALEHGPS STVRPLAAPV LAVVVASVIA
HGISATPLMD WYYRLQHRRG P