| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5595 |
|---|
| Symbol | |
|---|
| ID | 4314532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 29867 |
|---|
| End bp | 32098 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638153437 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_777476 |
|---|
| Protein GI | 115360339 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.670849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG ACGTACCGAT CGCCGAACTC GCGCGCGCGG CCGGGCTCGA ACCCGACTGG
ATCGACGCGG GCGGCGTCGC GCGGCGCGTG ACCGACGATT CGCTCGTCGC GCTCGTCGAT
GCGCTCGGCT GGCCCTGCGG CACGCCGATC GAGCGGGTCG ACAGCGCGGC GGCCCTCGTC
GATGCGCACG ACGCCGCGCC GCCGGTCGTG ACGGGCGACG CGGGCGTGCC GCTGACGCTG
CCGCGCAGCG TCGCGCCGCG CGGCGCGCGC TGGCGGATCA CGCTGGAATC GGGCGAGCAC
GTCGACGGGC GCGTGGCCGG CGCGGGCGAA TACGGCAGGC TGCCGCCGCT CGCGCAGCCC
GGCTATCACA CGCTCGACAT CGGCGAGCAC CGCATCGGGC TCGCGATCGC GCCGCCGCGC
GCGCGGCCGT TCGCCGCTGG CGACGGCCTG CCGGATGCGC AGCGCCGCTG GGGCATCTCG
GCCCAGCTCT ACAGCCTGCG GCGCGCGGGC GACGACGGTG CGGGCGACTA CACCGCACTC
GCGCGCCTCG CCGCGCAGGC CGCGCGGCAC GGGGCCGATG CGGTCGCGAT CAGCCCGACG
CATGCCGGCT ATCCGGCGCT GCCCGAGCAC AACAGCCCGT ATTCGCCGTC GTCGCGGCGC
TGGCACAACG TCGCGTATCT CGACTGCGAT GCCGTACCAG GCGCCGATGT CGTGCGGCGC
ACGAACGGCG CGGCGGCGGA CGTCGCATCC GCACCGGATA CGCCGCTGAT CGACTGGCCG
CAGGTGCTGC CACAGAAACT GCGACGCCTG CGCGCGTGCT TCGATGCGTG GCGTGCGAAC
GGCGAACCTG CGCGCGACGC GTTCGAGCAG TTTCGCGCGG CGGGCGGTGC GGCACTCGAC
GCGCATGCGC GCTTCGACGC GCTGCAGGCG TTCTGCATCG AACACGGGAT TGGCGCGGAC
TGGCGGCACT GGCCCGCGCA ATGGCGGATG CCGGCCACCG CCGAGGTCGA CGCATTCGCG
CACGCGCATG CCGACGCGAT TGCGTTCCAT ACGTTCCTGC AATGGTGCGC GTCGCGCGCG
CTCGGCGACG CGCAGCAGGC GGCGCGCGAT GCCGGGATGG CGGTCGGGCT GATCGCCGAC
CTCGCGGTCG GATCCGATCG CGCGGGCAGC GACGCGTGGG CGCACGGCAC GACGCTGTTG
CGCGGCGTGT CGGTCGGCGC ACCACCCGAC CTGTTCAATG CGGACGGCCA GGCGTGGGGC
GTGACGACGT GGACACCGGC CGCGCTGCGC GCGAACGGCT TCACGCCGTT CCTCGACCTG
TTGCGCGCGG CCTTCGCCCA TGCCGGCGGG ATTCGCATCG ATCATGTGCT CGGCTTCGCG
CGGATGTGGA TCGTGCCGGA AGGCGGATCG GCGCGCGACG GCGCGTACCT GCGTTATCCG
CTCGACGATC TGGTGCGGCT CGTCGCGCTG GAGGCCGCGC GGCACCGGGC GGTGGCGATC
GGCGAGGATC TGGGCACGGT GCCGGCGGGT TTTCGCGAGC GGCTCGGCGC GCAGGGCATC
GCCGGAATGC GCGTGCTGTG GTTCGAACGT GACGCGGATC GCGCATTTCG ACCGCCGTCG
GCGTGGGATC GCGACACGAT CGCGATGACG TCGACGCATG ACCTGCCGAC CGTGGCCGGC
TGGTGGCGGG GTATCGATCT CGAATGGCGG CGGGTGGCGG CCGAGGCCGC TGCGGCGCCG
ACCAAGCCGC ACCCTGCCGG TGACGACGTC GGCCGCGCCG CGGCCGCGCA CGACACCGGC
CACGACGCAC GGATCGATCC GGTCCTGCGT GGCGATGCGC CCGCCGCGGA TGACGGCCAC
GACGCGCCGC CCCCCGCTTC TTTCGACCTC CGCGCCGCCC AGGACGAGCG CACCACCGAC
CGCGCGGCGT TGTGGCGCGC GTTGCAGCAC GCGGGCTGCG CACCGGCCGG CGATCCGATT
CCGTCCGCCG ACACGCCGCC CGTCGGCGCA GTGCTCGCAT ACGTCGCGCG CAGCCCGTCG
CCGCTCGCGA TCGTGCCGCT CGAGGATCTG CTCGCGCTCG ACGAGCAACC GAATCTCCCC
GGCCCGCCGT GCGGTCATCC GAACTGGCTG CGCCGGCTGC CGCGCGCGGT CGACGCGCTG
TTAGACGCCG ACGCGCGCAC CCGCATTACG GCGATCGAGC ACGCGCGCCG AGCGCCGGAG
GACGACGCAT GA
|
|---|
| Protein sequence | MTTDVPIAEL ARAAGLEPDW IDAGGVARRV TDDSLVALVD ALGWPCGTPI ERVDSAAALV
DAHDAAPPVV TGDAGVPLTL PRSVAPRGAR WRITLESGEH VDGRVAGAGE YGRLPPLAQP
GYHTLDIGEH RIGLAIAPPR ARPFAAGDGL PDAQRRWGIS AQLYSLRRAG DDGAGDYTAL
ARLAAQAARH GADAVAISPT HAGYPALPEH NSPYSPSSRR WHNVAYLDCD AVPGADVVRR
TNGAAADVAS APDTPLIDWP QVLPQKLRRL RACFDAWRAN GEPARDAFEQ FRAAGGAALD
AHARFDALQA FCIEHGIGAD WRHWPAQWRM PATAEVDAFA HAHADAIAFH TFLQWCASRA
LGDAQQAARD AGMAVGLIAD LAVGSDRAGS DAWAHGTTLL RGVSVGAPPD LFNADGQAWG
VTTWTPAALR ANGFTPFLDL LRAAFAHAGG IRIDHVLGFA RMWIVPEGGS ARDGAYLRYP
LDDLVRLVAL EAARHRAVAI GEDLGTVPAG FRERLGAQGI AGMRVLWFER DADRAFRPPS
AWDRDTIAMT STHDLPTVAG WWRGIDLEWR RVAAEAAAAP TKPHPAGDDV GRAAAAHDTG
HDARIDPVLR GDAPAADDGH DAPPPASFDL RAAQDERTTD RAALWRALQH AGCAPAGDPI
PSADTPPVGA VLAYVARSPS PLAIVPLEDL LALDEQPNLP GPPCGHPNWL RRLPRAVDAL
LDADARTRIT AIEHARRAPE DDA
|
|---|
| |