| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5592 |
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| Symbol | |
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| ID | 4314529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 23639 |
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| End bp | 25840 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153434 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_777473 |
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| Protein GI | 115360336 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TGCTGTTCGA CCGCACCGAC ATCGACGCGC TGCTCGCCGG CCGCCATCCG
GACCCGTTCG CGTGTCTCGG CCCGCACACG GACGCCGGCC GGGTCGTCGT GCGCGCGCTG
CTTCCCGGTG CGCAGCGCGT GCGCGCGGTG ACGCCCGACG GCGACGAACT CGGCGCGCTC
GCATGCGTCG ACGACGCCGG CTGCTTCGCG GGCACGCTCG CGCACGACGG CCGCTACCGG
CTGGCCATCG ACTGGCCGGA CACACGCCAG ATCACCGACG ACGCGTATGC GTTCGGCACG
CTGCTCGACG AGGCCGCGCT CGCGCGTTTC GCGGCCGGCG ACCCGGCCGC CGTGCTCGAC
TGCCTGGGCG CGACGCCCAC GCGCGTCGAC GGCGTCGACG GCGTGCGCTT CGCGGTGTGG
GCGCCGAACG CGCAGCGCGT ATCGGTCGTC GGCGACTTCA ACATGTGGGA CGGCCGCCGG
CATCCGATGC GGTTGCGCCG GCCGTGGGGC GTGTGGGAGC TGTTCGTGCC GGGCATCGGC
GCCGGCGAAC ACTACAAGTA CGAGCTGCGC GCGGCCGACG GACACGTGCT GCCGCACAAG
GCCGACCCGT GCGCGCGCGC GACCGAAGCA CCGCCGCGCA CCGCGTCCGT GGTCGCCGAC
ACCGCGGCGC TCGACGCGTT CGCGTGGCAC GACGACGGCT GGCTGCACGC GCGGCCGCCC
GCGGACCAGC GCTTTCGCAT GCCATGGTCG ATCTACGAGG TACATGCGGA ATCGTGGCAG
CGCGTGCCCG AGGATATGGA TCGCAGCGCG AACTGGGACG AACTCGCCGA GCGGCTGATC
CCGTACGTGC GCGGCATGGG CTTCACGCAC GTCGAATTCA TGCCGATTTC CGAATACCCG
TTCGGCGGTT CGTGGGGCTA TCAACCACTT GCGCAGTTCG CGCCGTCGGC GCGCTTCGGG
CCCGTGGACG GCTTCGCGCG CTTCGTCGAC CGCGCGCACG CGGCCGGCAT CGGCGTGATC
GTCGACTGGG TGCCCGCGCA CTTCCCGAAC GACGCGCACG GCCTCGCGCA ATTCGACGGC
AGCGCGCTGT ACGAACACGC CGATCCGCGC GAAGGCATGC ACCCGGACTG GAACACCTGC
GTGTTCAACC TCGGACGCAA CGAGGTCAGC GCATTCCTCA TCGCGTCGGC GCTCGCGTGG
GCGCGCCGCT ATCACGTCGA CGGGATCCGC GTCGACGCGG TCGCGTCGAT GCTGTACCGC
GACTATTCGC GCAACGAAGG CGAATGGGTG CCGAACATCC ACGGCGGGCG CGAGAATCTC
GAATCCGTCG CGTTCCTGCG CGCGCTCAAC GACACGCTGC ACGGTACGCT CGCGCCGCCG
GGCGTCGTCA CCTTCGCGGA GGAATCGACC GCGTGGCCGG GCGTCACGGC GTCGACCGGC
GACGGCGGGC TCGGCTTCGA CTTCAAATGG AACATGGGGT GGATGCACGA CACGCTGTCG
TATGTGCGCG AGGATCCGAT CCATCGCCGC TATCACCACG ACCGGATGAC GTTCGGGCTC
GTCTATGCGT TCTCCGAACG ATTCGTGCTG CCGCTGTCGC ACGACGAGGT CGTGCACGGC
AAGGGCTCGC TCGCCGTGAA GATGCCGGGC GACGCGTGGC AGCGGCTCGC GACGCTGCGC
GCGTACTTCG GCTTCATGTG GGCGCATCCG GGCAAGAAGC TGCTGTTCAT GGGCAGCGAA
TTCGCGCAAT GGGCAGAGTT CGCGCACGAT GCGACGCCGC ACTGGGATCT GCTCGACGCA
CCCGCGCATC GCGGCGTGCA GCGGCTCGTG CGCGACCTGA ACCGCACCTA CGCGGCCGAG
CCGGCGCTGC ACGCGCTCGA CTGTCACGCG TCCGGCTTTT TCTGGCTGAT CGGCGACGAT
CGCGACAACA GCGTATTCGC GTTCGCGCGC CGCGACGATA GCGGGCGCCT CGTCGTCGCG
ATCTGCAACT TCACGCCGGT GCCGCGCCCC GGCTATCGCA TCGGGCTGCC CGCGCCCGGG
CACTGGCGCG AACTGATGAA CACCGATGCC GCCGTGTACG GCGGCACGAA TGCCGGCAAC
GACGGCGCCG TGTGGACGGA AGACGTGCCC TCGCACGGCC AGTCGTGGTC GGCGACCTTG
CGCCTGCCCC CGCTCGCGAC CCTATGGCTG AGCCCGGCCT GA
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| Protein sequence | MTDMLFDRTD IDALLAGRHP DPFACLGPHT DAGRVVVRAL LPGAQRVRAV TPDGDELGAL
ACVDDAGCFA GTLAHDGRYR LAIDWPDTRQ ITDDAYAFGT LLDEAALARF AAGDPAAVLD
CLGATPTRVD GVDGVRFAVW APNAQRVSVV GDFNMWDGRR HPMRLRRPWG VWELFVPGIG
AGEHYKYELR AADGHVLPHK ADPCARATEA PPRTASVVAD TAALDAFAWH DDGWLHARPP
ADQRFRMPWS IYEVHAESWQ RVPEDMDRSA NWDELAERLI PYVRGMGFTH VEFMPISEYP
FGGSWGYQPL AQFAPSARFG PVDGFARFVD RAHAAGIGVI VDWVPAHFPN DAHGLAQFDG
SALYEHADPR EGMHPDWNTC VFNLGRNEVS AFLIASALAW ARRYHVDGIR VDAVASMLYR
DYSRNEGEWV PNIHGGRENL ESVAFLRALN DTLHGTLAPP GVVTFAEEST AWPGVTASTG
DGGLGFDFKW NMGWMHDTLS YVREDPIHRR YHHDRMTFGL VYAFSERFVL PLSHDEVVHG
KGSLAVKMPG DAWQRLATLR AYFGFMWAHP GKKLLFMGSE FAQWAEFAHD ATPHWDLLDA
PAHRGVQRLV RDLNRTYAAE PALHALDCHA SGFFWLIGDD RDNSVFAFAR RDDSGRLVVA
ICNFTPVPRP GYRIGLPAPG HWRELMNTDA AVYGGTNAGN DGAVWTEDVP SHGQSWSATL
RLPPLATLWL SPA
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