| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5590 |
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| Symbol | |
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| ID | 4314527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 16822 |
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| End bp | 20232 |
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| Gene Length | 3411 bp |
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| Protein Length | 1136 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638153432 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_777471 |
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| Protein GI | 115360334 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA CACCGCCCTT CGCTCCTCAC ATCTACTTCT GCGACGCCCG CCTCGTCGGC
CCGCTCGATG CATGGCCCGA CACGTTCCAG CACATCGCCG GCATGGGCTT CGACCACGTG
CTGATCGGCG GCTTCTGGGC CGCCAGCGTC GCGGGCTTCC CGCGCCACGT CGCCGATTTT
CATCGGCCGG CCGCGACGTT CGCGACGCGC GCCGGCGCGC TCGAGACGTT CTCGCGCCTC
GCGCAGCTCG CGCACGGCCA CGGGCTGCGC GTGCTGCTCG AAGTGGTGCC GGACCGCATC
GCGCGCGACA ACCCGCTGCG CACCGAGCAT CCGGACTGGT ATGTCGAGCG CGCGCACGAC
GACGCATTGA TCGATCCGCG CAGCGCCGCG CATGAAATGG ATGTCGCGCA TGCCCAGGTC
GGCGAAGACG CCGCGCACGA CGCGCTGTCC GCGTGGTGGT GCACGCACCT CGCCACGTTC
GCGGATGCCG GTGCGTCGGG TTTCCTGATC GACGCGCCGC ATCACCTGCC GGCCGCGTGG
TGGCCCGGCT GGCGCGCGGC GCTGCGGCGC GCGCGCCCGG ACGTCGCGGT GCTGGCTGGC
GTGCCCGGCC ATGCGCGCGA CGCGCTCGCC CAGCTCGAGG CGGCCGGCTT CGATGCAGTG
TTCTCGTCGG TACGCTGGTG GGACCTGCAT GCGCCGTGGT TCGTCGACGA ACACCGGCTG
CTGCGGCGCA TCGGCTCGCC GATCGCGTTT CCGGACGCGA TCGACGGCCC GCGCCTCGCC
GACAACTGGA ATACCGCGCC GGACGAGACG GTCGCCCGCG CGTACCACCG CGCGTTGTGG
ACCGCCGCCG CGGTCGGCAC CGGCTGGCTC GTGCCGATGG GCTTCGAGCG CGGCGTCACG
CTGCCGCTGA TGGCGCGCGA CGCGGACGCC GCACGCTTCC GCGCCGCGCT GGACGACGCG
CGCTTCGACC TGTCCGGCGC GATCGCCGAC GCGAATGCAT GGCGCCGCGC GACACCGCTC
GCGGCCGAGC GCGGCGAAAT CGCGCAACTG AGCGCGCCGG GCGCGCGCGC GACGGCGCTG
CTGCGCGGCA GCGGCCCGTC GCTCGAACAC GACGACACGG CGCTGCTGAT CGCGTTGAAT
CCCGATCTCG ATGCGCCGAC GCACGTCGAT CCCGCGACGA TCCTGCCCGG CGTGCCGGGC
GGCTTCACGC ACGTCTCGCC GCCGAACGGC GCGCGCAAAT CCGCGCCCGC CGCGCCCGCC
GCGCCGGTCG CGCTGCAAGC CTTCACGCTC GAGCCCGGCG GCTATGCGTT GCTCGACGCG
CGGCGCGCGC CGCCCGCGCT CGCTCGCACC GATGCGGCGG GCGAGCGCAC CGCGCTGTCG
GCCGCGCTCG CGGCCGACCG GATCGCGATC GAGCGCGTCG AGCCGGCGGT CGACGGCGGC
CGCTTCGCGA TCAAGCGCGT GATCGGCGAA ACATTGGTTG TGCACGCATC GATCTTCACG
GACGGCCACG CGCATCTCGC GGCCGCGCTG CAGTGGCGAG CGGACGACGA GGACGCATGG
CGCGAAGTCC CGTTCGTCGC GGAGCCGAAC GATCGCTGGC ACGCGTGCAT CTCGCTCGAC
CGGCTCGGCC GCCACGCGTT CCGCGTGATC GCATGGCGCG ACGACTGGGC ATCGCTCGTC
ACCGACATCA CGAAGAAACG CGCGGCCGGC CAGGACGTGA CGCTGGAGCT ACGCGAGGCG
CAACTGCTGC TCGCGACCGC GTTGAAGCAC GCCGATGCGG TCGACCGGCG CGCGCGCACG
CGGATGGAAC AGCTCACGGC CGAGTTCAAC GACGCAGCGC CCGACAAGCG GCTCGAACTG
CTCGGCGCGC CCGCGCTCGC CGATGCGTAC GCGGCGCTGC GCTACCGGCC GTTCGTCACG
CACGACGACG CCGTCTACCC GGTCGACGTC GAACGTCGAG CCGCGCGCTT CTCGAGCTGG
TACGAGATGT TCCCGCGCTC GGCGAGCAAC GACCCGCACC GGCACGGCAC GTTCGACGAC
GTGATCGCGC AATTGCCGCG GATCCGCGAC ATGGGTTTCG ACGTGCTGTA TTTCCCGCCG
ATCCATCCGA TCGGCACGAC CGCGCGCAAG GGCCGCAACA ACACGCTGAC GGCCGGGCCC
GACGACGTCG GCAGCCCGTA CGCGATCGGC TCGCCCGAAG GCGGCCACAC GGCCGTGCAT
CCGCAGCTCG GCACGCTCGC GTCGTTCCGC ACGCTGGTCG ACGCCGCGCA TGCGCAGGGG
CTCGAGATCG CGCTCGATTT CGCGATCCAG TGCTCGCCCG ATCATCCGTG GCTCGCCGCG
CATCCGGGCT GGTTCGCGTG GCGGCCCGAC GGCTCGCTGC GCTATGCGGA GAATCCGCCG
AAGCGCTACC AGGACATCGT GAACCCCGAT TTCTACGCGC CGGATGCGCT GCCTGACCTG
TGGGTCGCGC TGCGCGACGC GGTGCTGTTC TGGGTCGACG CCGGCGTGCG GATCTTCCGC
GTCGACAATC CGCACACGAA GCCGCTGCCG TTCTGGGCGT GGATGATCGC GGACGTGCGC
GGCAAGCATC CGGACGTGGT GTTCCTGTCG GAGGCGTTCA CGCGGCCGGG GATGATGTAC
CGGCTCGCGA AGGTCGGCTT CTCGCAGTCC TACACGTATT TCACGTGGCG CGAGACGAAG
CGCGAATTCA TCGACTACCT GACCGAGTTG ACGGCCGGCC CTGCACGCGA GTTCTTCCGG
CCGAACTTCT TCGTGAACAC GCCCGACATC AATCCGCGCC ATCTGCAGAA CGCGCCGCGC
TCGCAGTTCG TGATCCGCGC GGCGCTGGCC GCGACGCTCG CCGGGTCGTG GGGCCTGTAC
TCGGGCTTCG AGATCGGTGA ATCGGCGCCG CTGCCCGACA GCGAGGAATA CGCGGACGCG
GAGAAATACG AGCTGCGCGT GCGCGACTGG CGCAAGGCCG CGCACATCGG CGGCGAAATC
GCGCGGCTCA ATCGCGCGCG GCGCGACCAT CCGGCGCTAC AGACCCATCT CGGCCTCACC
TTCGTCGATG CGGACAACGA CCAGGTGCTG GTGTTCGTGA AGGCGACGCC CGCGCACGAC
AGCGTCGTCG CGGTCGCGAT CAGCCTCGAC CCGTGGCATC CGCAGGCCGC GAATTTCACG
CTCGATGCGG CGCTGTGGCG CGGCTTCGGG CTCGTCGACG GCGAACCGCT CGACGCGCTC
GAACAGGACG CCGCGCATGC CGAAACCTGG CGCGGGCATC GCCAGTACGT ATCGCTCGAC
CCGCACGTTC GGCCGTATGC GATCTGGCGG CTCGCGCCGT CTCCCGGCGC CGCGCGAGCG
GCGGCGCCCG ACCCGGCCGA TGCCCGGGGC CATTCCGGAG CACACGGATG A
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| Protein sequence | MNPTPPFAPH IYFCDARLVG PLDAWPDTFQ HIAGMGFDHV LIGGFWAASV AGFPRHVADF
HRPAATFATR AGALETFSRL AQLAHGHGLR VLLEVVPDRI ARDNPLRTEH PDWYVERAHD
DALIDPRSAA HEMDVAHAQV GEDAAHDALS AWWCTHLATF ADAGASGFLI DAPHHLPAAW
WPGWRAALRR ARPDVAVLAG VPGHARDALA QLEAAGFDAV FSSVRWWDLH APWFVDEHRL
LRRIGSPIAF PDAIDGPRLA DNWNTAPDET VARAYHRALW TAAAVGTGWL VPMGFERGVT
LPLMARDADA ARFRAALDDA RFDLSGAIAD ANAWRRATPL AAERGEIAQL SAPGARATAL
LRGSGPSLEH DDTALLIALN PDLDAPTHVD PATILPGVPG GFTHVSPPNG ARKSAPAAPA
APVALQAFTL EPGGYALLDA RRAPPALART DAAGERTALS AALAADRIAI ERVEPAVDGG
RFAIKRVIGE TLVVHASIFT DGHAHLAAAL QWRADDEDAW REVPFVAEPN DRWHACISLD
RLGRHAFRVI AWRDDWASLV TDITKKRAAG QDVTLELREA QLLLATALKH ADAVDRRART
RMEQLTAEFN DAAPDKRLEL LGAPALADAY AALRYRPFVT HDDAVYPVDV ERRAARFSSW
YEMFPRSASN DPHRHGTFDD VIAQLPRIRD MGFDVLYFPP IHPIGTTARK GRNNTLTAGP
DDVGSPYAIG SPEGGHTAVH PQLGTLASFR TLVDAAHAQG LEIALDFAIQ CSPDHPWLAA
HPGWFAWRPD GSLRYAENPP KRYQDIVNPD FYAPDALPDL WVALRDAVLF WVDAGVRIFR
VDNPHTKPLP FWAWMIADVR GKHPDVVFLS EAFTRPGMMY RLAKVGFSQS YTYFTWRETK
REFIDYLTEL TAGPAREFFR PNFFVNTPDI NPRHLQNAPR SQFVIRAALA ATLAGSWGLY
SGFEIGESAP LPDSEEYADA EKYELRVRDW RKAAHIGGEI ARLNRARRDH PALQTHLGLT
FVDADNDQVL VFVKATPAHD SVVAVAISLD PWHPQAANFT LDAALWRGFG LVDGEPLDAL
EQDAAHAETW RGHRQYVSLD PHVRPYAIWR LAPSPGAARA AAPDPADARG HSGAHG
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