Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5580 |
Symbol | |
ID | 4314517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 6588 |
End bp | 7715 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153422 |
Product | alcohol dehydrogenase |
Protein accession | YP_777461 |
Protein GI | 115360324 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.606478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACCG AAAACGATAC GCGCGCCGTC ACCGCGGCCG TCGCCCGCGC CGCCGGCGCG CCCTTCTCGA TCGAGCCGGC CCGGATCCGC GCGCCGCGCG GCGACGAGGT GCTGGTGCGC GTCGTCGCGA CGGGCCTGTG CCACACCGAC CTGATCGTGC GCGACCAGTA CTATCCGGTG CCGCTGCCGG CGGTGCTCGG TCATGAAGGC GCCGGCGTGG TCGAGGCAGT CGGCCCGAAC GTGAAGATGC TCGCCGCCGG CGATCACGTC GTGCTGACCT ACGGCGCGTG CGGCCATTGC GCGTCGTGCG TCGGCGGTCA CGGCGCGTAT TGCCGGCAGT TCTTCGCGCT GAACTTCGGG GGTGCCGATG CCGACGGACA GACGGCCCTC CGCGACGCAG CGGGCGAACC GCTGCACGAT CATTTCTTCG CGCAGTCGTC GTTCGCGAGC TACGCGCTCG CGCGCGAGAA CAACGCGATC AAGGTGCCGA AGGAAGCGCC GCTCGAACTG CTCGGCCCGC TCGGCTGCGG GATCCAGACC GGCGCGGGCG CGGTGATCAA TTCGCTCGCG GTACGCACGG GCAGCAGCTT CGCGAGCTTC GGCGCCGGCG CGGTCGGCAT GAGCGCCGTG ATGGCCGCGC GTATCGCCGG CGCGACGGCG ATCATCGCCG TCGACATCGT GCCGTCGCGG CTCGCACTGG CGCTGGAGCT CGGCGCGACG CACGCGATCA ACAGCAAGGA AGTCGACGTC GCCGACGCGA TCCGCGAGAT CACCGGCGGC GGCGTCGACT ACGCGCTCGA ATCGACGGGG CTGCCGGCCG TGCTGTCGCA AGGGATCGAC GCGCTCGGCT CGCGCGGCAC GATAGGCGTG GTCGGCGCGC CGAAGCTCGG CACGAAGGCC GAATTCGACG TGAACAGCCT GCTGCTCGGC GGCCACACGA TCCGCGGGAT CGTCGAAGGC GACAGCGTGC CGCAGACCTT CATTCCGCAA CTCGTGCAGC TGCATCTGCA AGGCCGGTTC CCCTTCGACC GGCTGGTGAA GTTCTATCCG CTCGAGCAGA TCAACCAGGC CGCCGCGGAC AGCAGCAGCG GCATCACGCT CAAACCGATC CTACGGTTGC CGCATTGA
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Protein sequence | MYTENDTRAV TAAVARAAGA PFSIEPARIR APRGDEVLVR VVATGLCHTD LIVRDQYYPV PLPAVLGHEG AGVVEAVGPN VKMLAAGDHV VLTYGACGHC ASCVGGHGAY CRQFFALNFG GADADGQTAL RDAAGEPLHD HFFAQSSFAS YALARENNAI KVPKEAPLEL LGPLGCGIQT GAGAVINSLA VRTGSSFASF GAGAVGMSAV MAARIAGATA IIAVDIVPSR LALALELGAT HAINSKEVDV ADAIREITGG GVDYALESTG LPAVLSQGID ALGSRGTIGV VGAPKLGTKA EFDVNSLLLG GHTIRGIVEG DSVPQTFIPQ LVQLHLQGRF PFDRLVKFYP LEQINQAAAD SSSGITLKPI LRLPH
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