Gene Bamb_5580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5580 
Symbol 
ID4314517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp6588 
End bp7715 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content70% 
IMG OID638153422 
Productalcohol dehydrogenase 
Protein accessionYP_777461 
Protein GI115360324 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.606478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACCG AAAACGATAC GCGCGCCGTC ACCGCGGCCG TCGCCCGCGC CGCCGGCGCG 
CCCTTCTCGA TCGAGCCGGC CCGGATCCGC GCGCCGCGCG GCGACGAGGT GCTGGTGCGC
GTCGTCGCGA CGGGCCTGTG CCACACCGAC CTGATCGTGC GCGACCAGTA CTATCCGGTG
CCGCTGCCGG CGGTGCTCGG TCATGAAGGC GCCGGCGTGG TCGAGGCAGT CGGCCCGAAC
GTGAAGATGC TCGCCGCCGG CGATCACGTC GTGCTGACCT ACGGCGCGTG CGGCCATTGC
GCGTCGTGCG TCGGCGGTCA CGGCGCGTAT TGCCGGCAGT TCTTCGCGCT GAACTTCGGG
GGTGCCGATG CCGACGGACA GACGGCCCTC CGCGACGCAG CGGGCGAACC GCTGCACGAT
CATTTCTTCG CGCAGTCGTC GTTCGCGAGC TACGCGCTCG CGCGCGAGAA CAACGCGATC
AAGGTGCCGA AGGAAGCGCC GCTCGAACTG CTCGGCCCGC TCGGCTGCGG GATCCAGACC
GGCGCGGGCG CGGTGATCAA TTCGCTCGCG GTACGCACGG GCAGCAGCTT CGCGAGCTTC
GGCGCCGGCG CGGTCGGCAT GAGCGCCGTG ATGGCCGCGC GTATCGCCGG CGCGACGGCG
ATCATCGCCG TCGACATCGT GCCGTCGCGG CTCGCACTGG CGCTGGAGCT CGGCGCGACG
CACGCGATCA ACAGCAAGGA AGTCGACGTC GCCGACGCGA TCCGCGAGAT CACCGGCGGC
GGCGTCGACT ACGCGCTCGA ATCGACGGGG CTGCCGGCCG TGCTGTCGCA AGGGATCGAC
GCGCTCGGCT CGCGCGGCAC GATAGGCGTG GTCGGCGCGC CGAAGCTCGG CACGAAGGCC
GAATTCGACG TGAACAGCCT GCTGCTCGGC GGCCACACGA TCCGCGGGAT CGTCGAAGGC
GACAGCGTGC CGCAGACCTT CATTCCGCAA CTCGTGCAGC TGCATCTGCA AGGCCGGTTC
CCCTTCGACC GGCTGGTGAA GTTCTATCCG CTCGAGCAGA TCAACCAGGC CGCCGCGGAC
AGCAGCAGCG GCATCACGCT CAAACCGATC CTACGGTTGC CGCATTGA
 
Protein sequence
MYTENDTRAV TAAVARAAGA PFSIEPARIR APRGDEVLVR VVATGLCHTD LIVRDQYYPV 
PLPAVLGHEG AGVVEAVGPN VKMLAAGDHV VLTYGACGHC ASCVGGHGAY CRQFFALNFG
GADADGQTAL RDAAGEPLHD HFFAQSSFAS YALARENNAI KVPKEAPLEL LGPLGCGIQT
GAGAVINSLA VRTGSSFASF GAGAVGMSAV MAARIAGATA IIAVDIVPSR LALALELGAT
HAINSKEVDV ADAIREITGG GVDYALESTG LPAVLSQGID ALGSRGTIGV VGAPKLGTKA
EFDVNSLLLG GHTIRGIVEG DSVPQTFIPQ LVQLHLQGRF PFDRLVKFYP LEQINQAAAD
SSSGITLKPI LRLPH