| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5577 |
|---|
| Symbol | |
|---|
| ID | 4314537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 2508 |
|---|
| End bp | 3254 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638153419 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_777458 |
|---|
| Protein GI | 115360321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.101018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGG TCGACTCGAT TCACAAGCGA TTTCACGATC AGCACGTGCT GAAGGGGGTC
AGTCTGAATG TGGAACGCGG CCAGGTGGTA TGTCTGATCG GTCCATCGGG CTCGGGCAAA
TCCACGCTAT TACGCTGTAT CAACGGGCTG GAACGGCATG ACGCCGGAGA GATCACCGTC
GAGGGTCGCA CCGTCGACGC AAAATCGAAA CAGATCCACG AACTGCGCGC GCAGGTCGGC
ATGGTGTTCC AGCGTTTCAA TCTGTTTCCG CATCGCACGG CGCTGGAAAA CGTGTTCGAG
GGTCCCGTGT TCGTGAAGAA GCAAGCGCGC GCTCAGGCAC GCGAGCACGC GCGGCATCTG
CTCGACAAGG TCGGGCTTGC GCATCGTATG AACGCGCATC CGGCGGAACT GTCGGGCGGA
CAGCAGCAGC GCGTGGCGAT CGCGCGAGCG CTGGCCATGG AGCCCAAAGC GATTCTCTTC
GACGAACCCA CCTCGGCGCT CGACCCGGAA CTGGTCGGCG AAGTGCTCGG CGTGATGCGC
CAACTGGCCG ACGACGGCAT GACGATGATC GTCGTCACGC ATGAAATGGC GTTTGCGCGC
GAAGTGGCCG ACCGTGTGTG TTTTCTTCAC GACGGCGCGA TCCATGAAGA AGGCAGCGCG
GCCGAGTTGT TCGACCGTCC CCGCCATGCC CGCACGCGCG AGTTTCTCGG CAAGATGCCC
GCGCTTGCCG AAGCGCCCCG GATTTGA
|
|---|
| Protein sequence | MIKVDSIHKR FHDQHVLKGV SLNVERGQVV CLIGPSGSGK STLLRCINGL ERHDAGEITV
EGRTVDAKSK QIHELRAQVG MVFQRFNLFP HRTALENVFE GPVFVKKQAR AQAREHARHL
LDKVGLAHRM NAHPAELSGG QQQRVAIARA LAMEPKAILF DEPTSALDPE LVGEVLGVMR
QLADDGMTMI VVTHEMAFAR EVADRVCFLH DGAIHEEGSA AELFDRPRHA RTREFLGKMP
ALAEAPRI
|
|---|
| |