Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5569 |
Symbol | |
ID | 4314458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2642176 |
End bp | 2642829 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153411 |
Product | hypothetical protein |
Protein accession | YP_777450 |
Protein GI | 115360312 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTT ATCCGCAGGT ATTACGCAAC CGGCCGCGCA TGGTCGCCGC CTTCGTCGCG GGCGTGGCGT GCGCGGTGCT GCTGCCGCTC CAGTTGCGGC CGACCGCGCG CGTGCTGATC GGCTGGGATT GCACGGTCTG GCTGTATCTC GTGCTGATGT GGGTGCGCAT GGTCACCGCG CATCATCACA AGGTGCGCGA AGTCGCGATC CGCGAGGACG AGAACGCGAC GACCGTGCTG ACCGTCATCT GCCTCGCGAC GGTCGCGAGC GTCGCCGCGA TCGCGATCGA GCTCGCGACC GCGAAGAGCG TCGGCTTTCG CGCGGGGCTC GGCCATTACG CGATCACGGC CGCGACGCTG TTCGGCGCGT GGTTCCTGAT TCCGACGATC TTCACGCTGC ACTACGCGCG GCTCTATTAC GGCTCGCCGA CCGGCGATCG CTGGCTGCGC TTTCCCGATC GCAACCCCGA GCCCGACTAC TGGGATTTCC TGTATTTCTC GTTCACGATC GCGGTCGCGT CGCAGACGGC CGACGTGTCG CTCGCGAACC GCTCCGCGCG CCGCGCGGTG CTCGCGCAGT CGATCCTGTC GTTCTACTTC AACATGGCCG TGCTCGGGCT ATCGATCAAT GTCGCGGCGG GGTTGCTGAG CTGA
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Protein sequence | MTLYPQVLRN RPRMVAAFVA GVACAVLLPL QLRPTARVLI GWDCTVWLYL VLMWVRMVTA HHHKVREVAI REDENATTVL TVICLATVAS VAAIAIELAT AKSVGFRAGL GHYAITAATL FGAWFLIPTI FTLHYARLYY GSPTGDRWLR FPDRNPEPDY WDFLYFSFTI AVASQTADVS LANRSARRAV LAQSILSFYF NMAVLGLSIN VAAGLLS
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