Gene Bamb_5569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5569 
Symbol 
ID4314458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2642176 
End bp2642829 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID638153411 
Producthypothetical protein 
Protein accessionYP_777450 
Protein GI115360312 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT ATCCGCAGGT ATTACGCAAC CGGCCGCGCA TGGTCGCCGC CTTCGTCGCG 
GGCGTGGCGT GCGCGGTGCT GCTGCCGCTC CAGTTGCGGC CGACCGCGCG CGTGCTGATC
GGCTGGGATT GCACGGTCTG GCTGTATCTC GTGCTGATGT GGGTGCGCAT GGTCACCGCG
CATCATCACA AGGTGCGCGA AGTCGCGATC CGCGAGGACG AGAACGCGAC GACCGTGCTG
ACCGTCATCT GCCTCGCGAC GGTCGCGAGC GTCGCCGCGA TCGCGATCGA GCTCGCGACC
GCGAAGAGCG TCGGCTTTCG CGCGGGGCTC GGCCATTACG CGATCACGGC CGCGACGCTG
TTCGGCGCGT GGTTCCTGAT TCCGACGATC TTCACGCTGC ACTACGCGCG GCTCTATTAC
GGCTCGCCGA CCGGCGATCG CTGGCTGCGC TTTCCCGATC GCAACCCCGA GCCCGACTAC
TGGGATTTCC TGTATTTCTC GTTCACGATC GCGGTCGCGT CGCAGACGGC CGACGTGTCG
CTCGCGAACC GCTCCGCGCG CCGCGCGGTG CTCGCGCAGT CGATCCTGTC GTTCTACTTC
AACATGGCCG TGCTCGGGCT ATCGATCAAT GTCGCGGCGG GGTTGCTGAG CTGA
 
Protein sequence
MTLYPQVLRN RPRMVAAFVA GVACAVLLPL QLRPTARVLI GWDCTVWLYL VLMWVRMVTA 
HHHKVREVAI REDENATTVL TVICLATVAS VAAIAIELAT AKSVGFRAGL GHYAITAATL
FGAWFLIPTI FTLHYARLYY GSPTGDRWLR FPDRNPEPDY WDFLYFSFTI AVASQTADVS
LANRSARRAV LAQSILSFYF NMAVLGLSIN VAAGLLS