Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5558 |
Symbol | |
ID | 4314447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2633575 |
End bp | 2634342 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638153400 |
Product | AraC family transcriptional regulator |
Protein accession | YP_777439 |
Protein GI | 115360301 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCA TCCCGTCACC CGCCATCGCG CTGCGCCGTT ACGACACGTG CGAAGCGTCC GACGTGCACG ACTTTCATCA GGTCGTGCTC GGCGTCGATG GCGAGATGGT GATGGCGGTG GACGGCGTCG GCAAGCGCAT CGACCGGCAC GCGGCCTGGC TGATTCCGGC CGGCGCGCGC CATGATTACG CGGGCCTCGG CGACAATCGC CAGCTCGTGC TCGACCTGCC CGCCGCGTCG CTCGCGGTGC CGCAGCGGCT GTTCGACAGC GCGCGTGCGG TATCGATCGA CCCGGCGCTG ACCTCGCTCG TCGCGCAGGT CGCGGCGGCC GCCGAGCAAC TCGACGGGCC GGCCGGCGAC GCGCGGCACG CACATCGCTT CCAGTGGCAG GCCGCCGCGC GTCTGTGCGA CGCGCTGCTC GGCGACACCG GCCTCGCCGC GCCCGCGGCG GGCCTCGATT TCGCGCGCAT CGACCGCTGG CTGCGCGCCC GGCTCGCGGA GCCGCTGCGC ATCGCCGATC TCGCCGCGCA CTGCGGCTAC GGCATGCGGC GGTTTCATCA ATTGTTCGTC GACGCGTTCG GCGAAACCCC GCATCGTTAC CTGCAGCGGC TGCGGCTCGA CGCCGCCGTC GTGCTGCTCG CCGACGGCCG CCATCCGCTC GTCGACATCG CCGGCATGGT CGGCTTCGCC GACCAAAGCA CCTTCACGCA CGCGTTCACG AAGCGCTTCG GCGTCGCGCC GGGGCGCTGG CGCGGCGAAC GTCACTGA
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Protein sequence | MERIPSPAIA LRRYDTCEAS DVHDFHQVVL GVDGEMVMAV DGVGKRIDRH AAWLIPAGAR HDYAGLGDNR QLVLDLPAAS LAVPQRLFDS ARAVSIDPAL TSLVAQVAAA AEQLDGPAGD ARHAHRFQWQ AAARLCDALL GDTGLAAPAA GLDFARIDRW LRARLAEPLR IADLAAHCGY GMRRFHQLFV DAFGETPHRY LQRLRLDAAV VLLADGRHPL VDIAGMVGFA DQSTFTHAFT KRFGVAPGRW RGERH
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