Gene Bamb_5558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5558 
Symbol 
ID4314447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2633575 
End bp2634342 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content72% 
IMG OID638153400 
ProductAraC family transcriptional regulator 
Protein accessionYP_777439 
Protein GI115360301 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCA TCCCGTCACC CGCCATCGCG CTGCGCCGTT ACGACACGTG CGAAGCGTCC 
GACGTGCACG ACTTTCATCA GGTCGTGCTC GGCGTCGATG GCGAGATGGT GATGGCGGTG
GACGGCGTCG GCAAGCGCAT CGACCGGCAC GCGGCCTGGC TGATTCCGGC CGGCGCGCGC
CATGATTACG CGGGCCTCGG CGACAATCGC CAGCTCGTGC TCGACCTGCC CGCCGCGTCG
CTCGCGGTGC CGCAGCGGCT GTTCGACAGC GCGCGTGCGG TATCGATCGA CCCGGCGCTG
ACCTCGCTCG TCGCGCAGGT CGCGGCGGCC GCCGAGCAAC TCGACGGGCC GGCCGGCGAC
GCGCGGCACG CACATCGCTT CCAGTGGCAG GCCGCCGCGC GTCTGTGCGA CGCGCTGCTC
GGCGACACCG GCCTCGCCGC GCCCGCGGCG GGCCTCGATT TCGCGCGCAT CGACCGCTGG
CTGCGCGCCC GGCTCGCGGA GCCGCTGCGC ATCGCCGATC TCGCCGCGCA CTGCGGCTAC
GGCATGCGGC GGTTTCATCA ATTGTTCGTC GACGCGTTCG GCGAAACCCC GCATCGTTAC
CTGCAGCGGC TGCGGCTCGA CGCCGCCGTC GTGCTGCTCG CCGACGGCCG CCATCCGCTC
GTCGACATCG CCGGCATGGT CGGCTTCGCC GACCAAAGCA CCTTCACGCA CGCGTTCACG
AAGCGCTTCG GCGTCGCGCC GGGGCGCTGG CGCGGCGAAC GTCACTGA
 
Protein sequence
MERIPSPAIA LRRYDTCEAS DVHDFHQVVL GVDGEMVMAV DGVGKRIDRH AAWLIPAGAR 
HDYAGLGDNR QLVLDLPAAS LAVPQRLFDS ARAVSIDPAL TSLVAQVAAA AEQLDGPAGD
ARHAHRFQWQ AAARLCDALL GDTGLAAPAA GLDFARIDRW LRARLAEPLR IADLAAHCGY
GMRRFHQLFV DAFGETPHRY LQRLRLDAAV VLLADGRHPL VDIAGMVGFA DQSTFTHAFT
KRFGVAPGRW RGERH