Gene Bamb_5557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5557 
Symbol 
ID4314446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2632661 
End bp2633131 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID638153399 
ProductHxlR family transcriptional regulator 
Protein accessionYP_777438 
Protein GI115360300 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.689933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGC AGAGAAGTCT TGCGGATTCG CCGTGCCCGG TGGCGCGGGC GACCGATATC 
GTCGGCGATC GCTGGGCGTT GCTGATCGTG CGCGACGCGT TCGACGGCGT GCGCCGCTTC
GGCGATTTCC GCGCGAGCCT CGGCGTCGCG AGCAACATCC TGTCGGACCG GCTGAGGATG
CTGGTGGAGG CCGGCGTGTT CGACGTCGTG CCCGCGTCGG ACGGCAGCGC GTATCAGGAA
TACGCGTTGA CGAAGAAGGG CGACGGGCTG TTTCCGGTGA TCGTGATGCT GCGGCAGTGG
GGCGAGGCGA ACCTGTTCGC GCGCGGCGAG CCGCATTCGG TGCTGGTCGA GCGCAAGACG
GGCCGCGCGA TCCGCAAGCT CGCGCTGCGG CACGACGACG GCCGGCCGCT GAAGGCGTCC
GAGACGGTCG TGCGCAAGGT GGGTGACGAC GAGGGCGGGA CGCGGGGGTG A
 
Protein sequence
MARQRSLADS PCPVARATDI VGDRWALLIV RDAFDGVRRF GDFRASLGVA SNILSDRLRM 
LVEAGVFDVV PASDGSAYQE YALTKKGDGL FPVIVMLRQW GEANLFARGE PHSVLVERKT
GRAIRKLALR HDDGRPLKAS ETVVRKVGDD EGGTRG