Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5550 |
Symbol | |
ID | 4314439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2622574 |
End bp | 2624799 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153392 |
Product | hypothetical protein |
Protein accession | YP_777431 |
Protein GI | 115360293 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACA CGCAAGCAAA ACACACCTAC GCGGGTCCGG CCGCGAAAAC CGAGGAAGAG GACGTCGTCC TCGGCCAGTT GCTCCAGGTG ATCATGGACG ACATCTGGCT GCTGCTCGGC ATCGCGGTGA CCGTCATCGC GCTCGCCGGC CTGTACTGCT TCGTCGCGAA GCCGGTCTAT CAGGCCGACG TGCACGTGCG GGTCGAGGGC AACGACAACA CGTCGCAGGC GCTCACGCAG ACGCAGACGG GTGCATCGAT CAACAGCGGT CCGCAGCAGG CGCCGACCGA TGCGGAAATC GAGATCATCA AGAGCCGCGG CGTCGTCGCG CCGGTCGTCG AGGAGTTCAA GCTGAACTTC TCGGTCACGC CGAAGACGAT GCCGGGGATC GGCAGCCTGG CCGCGCGCAT CGCGACGCCG GGCGAGCCGT CGCGCGCGTG GTTCGGCCTG CGGTCGTACG CGTGGGGCGG CGAAGTCGCC GATATCGACT CGATCAACGT CGTGCCCGAG CTCGAAGGCA AGAAGTTGAC GCTGACGGCC GGCCCGGACG GCACCTACAC GGTGGTCGAC CAGAACGGCC GCCGCCTGTT GTCGGGCCGC GTCGGCGAAT CGGAGCAGGG CGGCGGCGTC ACGCTGCTCG TGCAGAAGCT CGTCGCGCGT CCGGGCACGC AGTTCACGGT GGTCCGCTAC AACGACCTCG ATGCGATCAC CGGCTTCCAG TCGGGCATCC AGGTGAGCGA GCAGGGCAAG CAGACGGGCG TCGTGCAGAT CTCGCTCGAA GGCAAGAATC CGGACCAGAC GGCCGCGATC GCGAACGCGC TCGCGCGGTC GTACCTGAAC CAGCACGTGA TCGCGAAGCA GGCCGAAGCG ACCAAGATGC TCGACTTCCT GAAGGGCGAG GAGCCGCGCC TGAAGGCCGA CCTCGAGCGT GCGGAAGCCG CGCTGACGCA GTATCAGCGC ACGTCAGGCT CGATCAACGC GAGCGACGAG GCGAAGGTCT ACCTGCAGGG CAGCGTGCAG TACGAGCAGC AGATCGCCGC GCAGCGCCTG CAGCTCGCGT CGCTCGCGCA GCGCTTCACC GACTCGCATC CGATGGTGAT CGCCGCGAAG CAACAGCTCG CGGAACTGCA GGGCGAGAAG GACAAGTTCA GCAACCGCTT CCGCAGCCTG CCGGCGACCG AAGTGAAGGC CGTCCAGCTC CAGCGCGACG CGAAGGTCGC CGAGGACATC TACGTGCTGC TGCTGAACCG CGTGCAGGAA CTGTCGGTGC AGAAGGCCGG CACGGGCGGC AACATCCACC TGATCGACTC GGCGTTGCGA CCGGGCGCCC CGATCAAGCC GAAGAAGGTG CTGATCCTGT CGGCCGCGGT GTTCCTGGGG CTGATCCTCG GCACCGGCGT CGTGTTCCTG CGCCGCAACC TGTTCCAGGG CATCGAGGAT CCGGACCGCG TCGAGCGCAC GTTCAACCTG CCGCTGTACG GGCTGGTGCC GCAAAGCGCC GAGCAGGTGA AGCTCGATGC GATGGCCGAG AAGGGCGGCG GCCGTGCGCG GCCGATCCTC GCGAGCCTGC GCCCGAAGGA TCTGAGCGTC GAAAGCATGC GCAGCCTGCG CACCGCGATG CAGTTCGCGA TGATGGACGC GAAGAACCGC GTGATCGTGC TGACCGGCCC GACGCCGGGG ATCGGCAAGA GCTTCCTGAC GGTCAACCTC GCGGTGCTGC TCGCGCATTC GGGCAAGCGC GTGCTGCTGA TCGATGCCGA CATGCGCCGC GGGATGCTCG ACCGCTACTT CGGCCTCACC GCGCAGCCGG GCCTGTCCGA GCTGCTGAGC GATCAGTCGG CGCTGGAGGA CGCGATCCGC GAGACGCCGG TGCAGGGCCT GTCGTTCATC TCGGCCGGCA CGCGCCCGCC GAACCCGTCG GAGCTGCTGA TGTCGACGCG TCTGCCGCAA TACCTCGAAG GGCTCGGCAA GCGCTACGAC ATCGTGCTGA TCGACTCGCC GCCGGTGCTG GCGGTGACCG ACGCGACCAT CATCGGCCGC ATGGCCGGCG CGACCTTCCT GGTGCTGCGC TCGGGCATGC ACACCGAAGG CGAGATCGCC GACGCGATCA AGCGCCTGCG TACCGCGGGC GTCGATCTGG AAGGCGGGAT CTTCAACGGC GTGCCGCCGA AGGCGCGCGG CTACGGCCGC GGCTATGCGG CCGTCCACGA ATACCTGAGC GCCTGA
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Protein sequence | MVNTQAKHTY AGPAAKTEEE DVVLGQLLQV IMDDIWLLLG IAVTVIALAG LYCFVAKPVY QADVHVRVEG NDNTSQALTQ TQTGASINSG PQQAPTDAEI EIIKSRGVVA PVVEEFKLNF SVTPKTMPGI GSLAARIATP GEPSRAWFGL RSYAWGGEVA DIDSINVVPE LEGKKLTLTA GPDGTYTVVD QNGRRLLSGR VGESEQGGGV TLLVQKLVAR PGTQFTVVRY NDLDAITGFQ SGIQVSEQGK QTGVVQISLE GKNPDQTAAI ANALARSYLN QHVIAKQAEA TKMLDFLKGE EPRLKADLER AEAALTQYQR TSGSINASDE AKVYLQGSVQ YEQQIAAQRL QLASLAQRFT DSHPMVIAAK QQLAELQGEK DKFSNRFRSL PATEVKAVQL QRDAKVAEDI YVLLLNRVQE LSVQKAGTGG NIHLIDSALR PGAPIKPKKV LILSAAVFLG LILGTGVVFL RRNLFQGIED PDRVERTFNL PLYGLVPQSA EQVKLDAMAE KGGGRARPIL ASLRPKDLSV ESMRSLRTAM QFAMMDAKNR VIVLTGPTPG IGKSFLTVNL AVLLAHSGKR VLLIDADMRR GMLDRYFGLT AQPGLSELLS DQSALEDAIR ETPVQGLSFI SAGTRPPNPS ELLMSTRLPQ YLEGLGKRYD IVLIDSPPVL AVTDATIIGR MAGATFLVLR SGMHTEGEIA DAIKRLRTAG VDLEGGIFNG VPPKARGYGR GYAAVHEYLS A
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