Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5549 |
Symbol | |
ID | 4314438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2621345 |
End bp | 2622523 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153391 |
Product | polysaccharide export protein |
Protein accession | YP_777430 |
Protein GI | 115360292 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAC GTCCCATGCG CCCGCTGGCG CTCGCCGTCG CGATGACGAC ATTCCTGTCG GCCTGCGCGA CCGCGCCCGG CAACTATCTC GATTCGTCGA ACCTGAAGGA CGAGGGCCGC CAAGGCCAGG CCGAAACCTA TCCGGTTCAT TACATCGACG CGAAGCTGGT GATGGATCAG CTGCAGAAGC AGCAGGTCGA GCACCCGCTG CCGCCGGGCC GTTACACCGA TCCGTCGCAG TACGTTTACC GCGTCGGCCC GCAGGACATC CTCGGCGTCA CGGTTTGGGA TCACCCCGAG CTGACGACGC CGCAGGGCCA GTCGTTCTCG AGCGGCGGCA ACACGACGCA GTCGGTCGCG GGCGCGCTCC AGCAGCCGTA TACGACCGCG CTGCCGGGTC AGGCCGATCC GTACGGCCAG ACCGTGTCCG CCGACGGCTC GATCTTCTTC CCGTTCGTCG GCCGCATTCA CGTGGCCGGC AAGACGGTCG CGCAGATCCG CGAGCAGATG TCGTCCACGC TCGCGCGCTA TGTGAAGAAT CCGCAGCTCG ACGTGCGCGT GCTGTCGTTC CGCAGCCAGA AGATACAGGT GACGGGCGAG GTGAAGCAGC CGGGCCCGCT CGCGGTGAGC GACGTGCCGC TGACGCTGGT CGACGCGATC TCGCGCTCGG GCGGCTCGAC CAACGAGGCC GACCTGCAGC GCGTGCGCCT GACGCGCGAC GGCAAGCTCT ACACGCTCGA CGCGAACGGC GTGCTCGATC GCGGCGAAGT GAAGCAGAAC GTGATGCTGC AGCCGGGCGA CATCGTCAAC GTGCCGGACC GCAGCGACAG CCGCGTGTTC ATCATGGGCG AGGTCAAGAC GCCGGTCACG GTGCCGATGC TCAAGGGCAG GCTGACCATC GCCGACGCGC TCACCGCCGG CGGCGGCATC CTCGACACCG ATGCGAACCC GCGCAAGATC TACGTGATGC GCGGGATGCG TGACAACCCG ACGAAGCCGG AAGTGTATCG CCTCGACATG ACGCAGCCGG ATGCGCTGAT GCTGTCGAGC CGCTTCCCGC TCCAGCCGCT CGATGTCGTC TACGTCAGCA CGGCCGGCTC GGTGCAGTTC AACCGTGTGC TGCAGCAGGT GTTGCCGACG ATCCAGACGA TCTTCTACAT GCGGCAGATC ACGCGCTGA
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Protein sequence | MLKRPMRPLA LAVAMTTFLS ACATAPGNYL DSSNLKDEGR QGQAETYPVH YIDAKLVMDQ LQKQQVEHPL PPGRYTDPSQ YVYRVGPQDI LGVTVWDHPE LTTPQGQSFS SGGNTTQSVA GALQQPYTTA LPGQADPYGQ TVSADGSIFF PFVGRIHVAG KTVAQIREQM SSTLARYVKN PQLDVRVLSF RSQKIQVTGE VKQPGPLAVS DVPLTLVDAI SRSGGSTNEA DLQRVRLTRD GKLYTLDANG VLDRGEVKQN VMLQPGDIVN VPDRSDSRVF IMGEVKTPVT VPMLKGRLTI ADALTAGGGI LDTDANPRKI YVMRGMRDNP TKPEVYRLDM TQPDALMLSS RFPLQPLDVV YVSTAGSVQF NRVLQQVLPT IQTIFYMRQI TR
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