| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5536 |
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| Symbol | |
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| ID | 4314425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2606939 |
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| End bp | 2608822 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153378 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_777417 |
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| Protein GI | 115360279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.8971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATT CGATCGCGGC ACGCGATTTT GCCGTCAAGA TGCGTCCCGA ACCTTCGAAT
TTTCTTCCTG TGTGCCACGC CATGTCACTC CTGCCGTCAT CGCTCGCGCT TGCCGCCTTT
CTTGTTCTCT CCGTTCCGCC CGCCACCGCC GCGCTGCCGG TGAGCACGGG CTGCGGCGGC
GCCACCACCG CGATCGCCGA CATCCGGCAT CCCGCGGGCC GCTCGCCGCT GGCCGGGCAC
ACCACGTCGA TCGAAGCAGT CGTCACCGCG GCGTTCGGCG GCCCCGATGG CTTCGGCGGA
TTCTTCGTCC AGCAGGCGGA CGCGCAGCGG CGACACCGGC CGGGCGTGCC GGAAGGCCTG
TTCGTATATG CGCCGCATGC GCATGTGCAG CCGGGCGAGC GCGTGCACAT CACCGGCAGG
ATCGAACAGA AATACGGCCG GACGCAACTC GCGTTGGCGG GCCGCGTGGC CGTCTGCGCA
CGCGGGCAGA GCGTCACGCC GGCCGCGCTG ATGCTGCCGG TCGATAGTGA CGCCGTATTC
GCCGCGCATG AAGGCATGCG CGTGCGCTTT CCGCAAACGC TGACGGTCAG CGATACTTAC
GAACTCGGCC GCTACGGCAG CATCGTGCTC AGCCACGGCC GCCTGTACAT GCCGACTCAC
GTGGCGCCGC CGGCCGAAGC CGCTGCGCAC GCGGCGGCCA ATGCACGCAA CCGCATCGTG
CTCGACGACG GTTCGAGCCG CGTGAACCCT GCAACCGCCC GCTATCCGCC GCCTGCGCTG
AGCGCCGCCA ACACGCTGCG CGCGGGCTAC ACGGTGCGCG GCATCGAAGG TGTGCTCGAA
CTGCGCTACG GCACGTGGCG ATTGCAGCCC GTATCGTCCT CGCCACCCAC CTTCGAGGCC
GCGTCGAATC CGCGGGCCGA TGCGCCCGCA CGGCATCCGC AAGCCGACGT GCGGGTCGCG
TCGTTCAACG TATTCAACTA CTTCAACGGC GACGGCGCGG GCGGCGGCTT CGGCGATCCG
TCCGGCCGTG GCGCGAAAAC CCCCGCCGCC TTCGCGCGGC AGGAAGCGAA GCTCGTGGCC
GCGCTGCGTG CCCTGCGCGC CGACGTGATC GGCCTGATGG AAATCGCGAA CAACGGGCAC
GGCCCGGCGA GCGCCGTGCA GCGGCTCGCG GCCCGGCTCG GCGGCGGCTG GCGCGCGGTC
GACCCCGGCA CCGCACGGCT CGGGCGCGAT GCGATCGCGG TCGCGCTGTT GTATGACAGC
CGGACGATCG AGCCCGTCGG GCGCGCCGCG ACCGTCGCGC TCGACGGCCG GAATCGCCCG
CCGCTCGCGC AGACGTTCCG TCGCGTCGAC GGCACCCGCG CGTTCACGGT CGCGGTCAAC
CACCTGAAGT CGAAGAATTG CCCGCACGCC ACCGGCCCGG ATCTCGACCA GTCGGACGGC
CAGGGCTGCT GGAATGCAAC GCGCACGCGC GCAGCCGAAC GCGTCGCCGG CTGGCTTGCG
ACGTCGCCGA CCGGCGCCGC GGCCGACGGC GTGCTGCTGA TCGGCGATCT GAACAGCTAT
GCGAAGGAAG ACCCGCTGCG CGCGCTCGAA TCGCGCGGCT ACACCAACCT CGTCGCCCGC
TTCGTCGGCA ATGCCGGCTA CACGTATGTA TTCCACGGCG AAGCGGGCAA CCTCGACCAC
GCACTCGCGA CGCCGCCGCT CGCCGCCCGC GTGAAAGCCG TGCACACGTG GCACATCAAT
GCAGATGAAC CGATTGCACT CCAAGCCGTG CCCGATTACA AAACCCCGGC GCAACAGGCC
GCCTATTACG CGCCCGATGC ATACCGTTCG TCGGATCATG ATCCCGTCGT CATCGACGTT
GCGCTGGAGG AAGGCGCCAC CTGA
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| Protein sequence | MANSIAARDF AVKMRPEPSN FLPVCHAMSL LPSSLALAAF LVLSVPPATA ALPVSTGCGG
ATTAIADIRH PAGRSPLAGH TTSIEAVVTA AFGGPDGFGG FFVQQADAQR RHRPGVPEGL
FVYAPHAHVQ PGERVHITGR IEQKYGRTQL ALAGRVAVCA RGQSVTPAAL MLPVDSDAVF
AAHEGMRVRF PQTLTVSDTY ELGRYGSIVL SHGRLYMPTH VAPPAEAAAH AAANARNRIV
LDDGSSRVNP ATARYPPPAL SAANTLRAGY TVRGIEGVLE LRYGTWRLQP VSSSPPTFEA
ASNPRADAPA RHPQADVRVA SFNVFNYFNG DGAGGGFGDP SGRGAKTPAA FARQEAKLVA
ALRALRADVI GLMEIANNGH GPASAVQRLA ARLGGGWRAV DPGTARLGRD AIAVALLYDS
RTIEPVGRAA TVALDGRNRP PLAQTFRRVD GTRAFTVAVN HLKSKNCPHA TGPDLDQSDG
QGCWNATRTR AAERVAGWLA TSPTGAAADG VLLIGDLNSY AKEDPLRALE SRGYTNLVAR
FVGNAGYTYV FHGEAGNLDH ALATPPLAAR VKAVHTWHIN ADEPIALQAV PDYKTPAQQA
AYYAPDAYRS SDHDPVVIDV ALEEGAT
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