Gene Bamb_5533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5533 
Symbol 
ID4314422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2604279 
End bp2605346 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID638153375 
Producthypothetical protein 
Protein accessionYP_777414 
Protein GI115360276 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAC CATCCATGGA TAGCGGACAC GATCACCAAA AATTCTTCTA TTTCCTGCTG 
TTCGCGGTCA CCGTCGGACT GTGCTGGATA CTCGCGCCGT TCTCCGGCGC CGTCTTCTGG
GGCACCATTC TCGCGATCCT GTTCCAGCCG GTGCAGCGCT GGCTCGCCGC GCGTTTCGGC
AAGCGGCGCA ATCTCGCCGC GCTCGTGTCG ATGTCGCTGA TCATCCTGAT CGTGATCCTG
CCGCTCGTGT TCGTCACGGC GACGCTCGTG CAGGAAATCG CGTACGTGTA CCAGGAACTG
AAGGACGCAC AGCCGAATTA TTCGCGGTAC TTCCACGACA TCATTCACGC GCTGCCGACG
TCGATCCAGA ACCTGCTGCA GAAATACGGG CTGTCCAACA TCCCCGGCAT CCAGAAGAAG
CTGACCGACG GCGCCGCGCA GATCAGCCAG TTCGCGGCCA CCCAGGCGCT CAGCATCGGC
CAGAACACGT TCCAGTTCGT CGTCAGCTTC GGCGTGATGC TGTACATGCT GTTCTTCCTG
CTGCGCGACG GCGGCGAGAT CGGCCGCCGC GTGCGCCGCT CGATACCGCT CGACGAAGAG
CACAAGAACC TGCTGCTCGC GAAGTTCACA ACCGTTGTGC GCGCAACCGT GAAAGGCAAT
ATCGCGGTCG CGCTCGTGCA GGGCGCGCTC GGCGGCCTGA TCTTCTGGAT CCTCGGAATC
GAGGGCGTCG TGCTGTGGGG CGCGCTGATG GCGTTCCTGT CGCTGCTGCC GGCGATCGGC
GCGAGCCTCG TGTGGATACC CGCCGCGCTC TACTTCCTCG CGATCGGCGC GATCTGGAAA
TGCGTGATCC TCGTCGCGTT CTGCGTCGGC GTGATCGGCC TCGTCGACAA CCTGCTGCGC
CCGATCCTCG TCGGCAAGGA CACGAAGATG CCCGACTGGG TCGTGCTGAT CTCGACGCTC
GGCGGGATGG CGCTGTTCGG GATCAACGGC TTCGTGATCG GACCGCTCGT CGCCGCGTTG
TTCATGGCAA GCTGGGACAT CTACGCACGC TCCGAACAGG GGGAATGA
 
Protein sequence
MREPSMDSGH DHQKFFYFLL FAVTVGLCWI LAPFSGAVFW GTILAILFQP VQRWLAARFG 
KRRNLAALVS MSLIILIVIL PLVFVTATLV QEIAYVYQEL KDAQPNYSRY FHDIIHALPT
SIQNLLQKYG LSNIPGIQKK LTDGAAQISQ FAATQALSIG QNTFQFVVSF GVMLYMLFFL
LRDGGEIGRR VRRSIPLDEE HKNLLLAKFT TVVRATVKGN IAVALVQGAL GGLIFWILGI
EGVVLWGALM AFLSLLPAIG ASLVWIPAAL YFLAIGAIWK CVILVAFCVG VIGLVDNLLR
PILVGKDTKM PDWVVLISTL GGMALFGING FVIGPLVAAL FMASWDIYAR SEQGE