| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5517 |
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| Symbol | |
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| ID | 4314406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2586014 |
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| End bp | 2588323 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638153359 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_777398 |
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| Protein GI | 115360260 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0873322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.1808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG ATGACGATCT GAGCCACCTG TCGCTGCTCG AGCTGTATCG CGAGGAGACG
CGCACGCAAA CCCAGGCGCT GTCCGAACGC CTGCTCGCGC TCGAATCGGG CGAGCCCGAT
TCCGTCGCGC TCGAGGCGTG CATGCGCGCC GCGCATTCGC TGAAGGGCGC CGCACGCATC
GTCGGCGTGC CGCTCGGCGT CGAGATCGCG GGGCGGATGG AAGAATGCTT CGTCGCCGCG
CAGGCCGGCA CCATCGCACT GACGGCCACG CATGTCGACG TGCTGCTCGC CGGCGTCGAC
CTGCTGGTGC GCGTCGCCGA TCCGCAGGCG CCGCCCGTGT CGTCGACGGA GATCGACGCG
TTCGCGCTGG CGCTCACGGG CGCCGACGGC GCGCACGCGA TGCCGGCACC GACCTTCGCG
CCGCCGCCGG CGCCGCCGTC CAGCGTGCCG TTTCGCGATC ACGACGGCGC CGCGAACGAG
CCCGTGGGGG CCGGCGCCGC GGTGCCGCCG CTCGCCCTGT CGGCGGCGGT GCCCGATCCG
GTCCCGGCGG GACGTGCGGC CGGCGCGGGC GCGATGCGCC GCGTGCGGGC CGATACGCTG
AACCGGCTGC TGAGCCTGTC CGGCGAGTCG CTCGTCGAAT CGCGCTGGCT CAAGCCGTTC
GCGGAATCGA TGCTGCGCGT GAAGCGTGCG CAGCGCGACG CGGCCCGCTC GCTCGATCTG
TTGTACGAAC GGTTCGCCGA CGAGCTCGAT GCGGGCGTGC TCGCGTCGGT CAACGAAGTG
CGGCACATGC TCAACGACGT ACAGCGTTCG CTTGCCGAGC GCATGGAAGA ATTCGACCGC
TTCGAGCGCC GCAGCACGCA CATCGCCGAG CAACTGTACG ACGAGGCGCT TCAATGCCGG
ATGCGCCCGT TCGGCGACGC GACGCGCGCG TATCCGCGCA TCGTCCGCGA TCTCGCGCGC
TCGCTCGGCA AGCAGGTGCG CTTCTCGATC GTCGGCGAAG GCACGCAGGT CGACCGCGAC
ATCCTCGACC TGCTCGACGC GCCGCTCGGC CACCTGCTGC GCAACGCGAT CGATCACGGC
GTCGACTCGC CCGATGCGCG TCGCGCGCGC GGCAAGCCGG CCGAGGCGAG CGTGACGCTC
GAAGCGCGAC ACAGCGCCGG CTCGCTGCTC GTCAGCGTGA TCGACGACGG GCCGGGCGTC
GACATGGACG CGCTGCGCGC GGCGGTCGTG CGCCAGCGCC TGACCGACGA CGAGACGGCC
GCGCGGCTGT CCGATCCGGA ACTGCTCGAA TTCCTGCTGC TGCCGGGCTT CTCGATGCGC
GATGCGGTGA CCGACGTGTC GGGACGCGGC GTCGGCCTCG ATGCGGTGCA GGAAATGGTG
CGCGGCGTGC GCGGCGCGGT GCGCATCTTC AACGAGCCCG GCGCGGGCAT GCGCTTCGTG
CTGCAGCTGC CGCTCACGCT GTCGGTGATC CGCAGCCTGC TGGTGGAGGT CGGCGGCGAG
CCGTACGCGT TCCCGCTCGC GCACGTGCGC CGCACGCTCG AACTGTCGCA CGACGACATC
GACGTGCTCG AAGGACAGCC GCATTTTCCG TTCGACGGCC GGCGTGCGGG CCTCGTCGGC
GCGCACCAGC TGCTCGATGC GGGGGAGCCC GCCGTCACGC GCACGAGCAC GGCGGTCGTG
GTCGTCGGCG GCGAGCCCGA GCTGTACGGC GTCGCCGTCG ACCGCTTCCT CGGCGAACGG
ATGCTCGTCG TGCAGCCGCT CGACAGCCGC CTGCAGAAGA TCCAGAACAT CGCGGCCGGT
GCGTTGCTCG AGAACGGCGA CCCGGTGCTG ATCGTCGATG TCGAGGATCT GATCCGCTCC
GTCGACAAGC TCGTGCGCGG CGGCCAGCTC GCGAAACTCA CGCGCGATCC GCAGCTCGCA
CGGGCCGACC GGCGCCGCCG CGTGCTCGTC GTCGACGATT CGCTGACGGT GCGCGAGCTC
GAACGCAAGC TGCTGGAAAA GCGCGGCTAC GACGTGACCG TCGCGGTCGA CGGGATGGAC
GGCTGGAACG CGGTGCGCAG CGATGCGTTC GACCTGGTCG TCACCGACGT CGACATGCCG
CGCATGGACG GGATCGAGCT CGTCACGCTG ATCAGGAGCG ATCCGGCGCT CAAGCGGGTG
CCCGTGATGA TCGTGTCGTA CAAGGATCGC GACGAGGATC GCCGGCGCGG GCTCGATGCC
GGCGCCGACT ACTATCTCGC GAAGAGCAGT TTCCACGACG AGGCGCTGCT CGATGCGGTG
CACGACCTGA TCGGCGGGGC ACGCGGATGA
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| Protein sequence | MSGDDDLSHL SLLELYREET RTQTQALSER LLALESGEPD SVALEACMRA AHSLKGAARI
VGVPLGVEIA GRMEECFVAA QAGTIALTAT HVDVLLAGVD LLVRVADPQA PPVSSTEIDA
FALALTGADG AHAMPAPTFA PPPAPPSSVP FRDHDGAANE PVGAGAAVPP LALSAAVPDP
VPAGRAAGAG AMRRVRADTL NRLLSLSGES LVESRWLKPF AESMLRVKRA QRDAARSLDL
LYERFADELD AGVLASVNEV RHMLNDVQRS LAERMEEFDR FERRSTHIAE QLYDEALQCR
MRPFGDATRA YPRIVRDLAR SLGKQVRFSI VGEGTQVDRD ILDLLDAPLG HLLRNAIDHG
VDSPDARRAR GKPAEASVTL EARHSAGSLL VSVIDDGPGV DMDALRAAVV RQRLTDDETA
ARLSDPELLE FLLLPGFSMR DAVTDVSGRG VGLDAVQEMV RGVRGAVRIF NEPGAGMRFV
LQLPLTLSVI RSLLVEVGGE PYAFPLAHVR RTLELSHDDI DVLEGQPHFP FDGRRAGLVG
AHQLLDAGEP AVTRTSTAVV VVGGEPELYG VAVDRFLGER MLVVQPLDSR LQKIQNIAAG
ALLENGDPVL IVDVEDLIRS VDKLVRGGQL AKLTRDPQLA RADRRRRVLV VDDSLTVREL
ERKLLEKRGY DVTVAVDGMD GWNAVRSDAF DLVVTDVDMP RMDGIELVTL IRSDPALKRV
PVMIVSYKDR DEDRRRGLDA GADYYLAKSS FHDEALLDAV HDLIGGARG
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