Gene Bamb_5514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5514 
Symbol 
ID4314403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2583193 
End bp2583705 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content72% 
IMG OID638153356 
ProductCheW protein 
Protein accessionYP_777395 
Protein GI115360257 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0719393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.978075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGCG CCGAGTCGCA CGGCGGCGCG CATGCGCTGT TCCTGATGTT CGAGCTCGAC 
AGCGAGCGCT ATGCGCTCGA CGCGGCCGAC ATCGACGAAG TGTTGCCGCT CGCGACCACC
AAGGCCGTGC CCGGCGCGCC CGACTGGATC GCCGGGCTGC TGATGCGGGG CGGTCAGCCG
GTGCCCGTGA TCGACGTGCC GATGCTGGCG CTCGGGCGGC GCGCGCATGC GCTGCGTTCG
ACGCGGCTGG TGATGGTGCG CTACCGCGTC GAGCCGCTCG ATCGCGAGCG CGTGATCGGC
CTGATCGTCG AGCGCGCGAC GCAGACGCTG CGAATCGATC GCGCGGCGTT CCGCGCCAGC
GGCGTGTCGA CCGCGCGCAC GCGCTGGCTC GGGCACGTCG CGAACACGCC CGACGGAATC
GTGCAGCAGG TGTCGGTATC CGACCTGATC GACGACGTTG CGCGCCTGTA TCTGTTCGAC
GGCCTGCCGG GCCACGGAGG GGAGTCCGCA TGA
 
Protein sequence
MTRAESHGGA HALFLMFELD SERYALDAAD IDEVLPLATT KAVPGAPDWI AGLLMRGGQP 
VPVIDVPMLA LGRRAHALRS TRLVMVRYRV EPLDRERVIG LIVERATQTL RIDRAAFRAS
GVSTARTRWL GHVANTPDGI VQQVSVSDLI DDVARLYLFD GLPGHGGESA