Gene Bamb_5511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5511 
Symbol 
ID4314400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2578107 
End bp2579690 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content68% 
IMG OID638153353 
ProductNa+/H+ antiporter 
Protein accessionYP_777392 
Protein GI115360254 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCG TCTCGGCGTT CAAGCTGGTT CTGTTGTCGT TTCTCGCGAT CGTCGCGCTC 
GAATGCATCG CCAAGCGGTT GCGGTTGCCG CCTGCGGCCG CGCTGCTGAT CGGCGGCATC
GGCATCGCGT TCATTCCTGG TCTGCCGCCG ATCAACCTCG ATCCGGAGCT CGTGCTGCTC
GTGTTCCTGC CGCCGCTGCT GATGGACGGC GCGTATTTCT CCGTATGGGA GGAGTTCAAG
CGCAACGTCG GCGGCATCCT GATGCTCGCG ATCGGCGCGG TGGTGTTCAC GACATTCGCG
GTCGGTTTTG CCGTGCACTG GGTCGTGCCG TCGCTGCCGT GGGCCGCATG CTTCGCGCTG
GGCGCGATCG TGTCGCCGCC CGACGCGGTG GCCGCGAAGG CGGTGCTCGA ACGCGTCGCG
CTGCCGCGCC GGCTGATGGT GCTGCTCGAA GGGGAAAGCC TGTTGAACGA CGCGGCCGGC
CTGGTGCTGT TCCGCTTCGC GGTCGCCGCC GCGCTGACGG GCGCGTTCAG TTTCGAGCAC
GCGGTCGTGC GCTTCGCGGA GCTCGGGCTC GGCGGCGTCG TGGTCGGCTA CCTGGTCGGT
AAGCTCGTCG TGTGGTTCCT GAAGCTGCTC GACGACGACT ATCTGGTGAT TACTGTCGCG
GTGATCGCCG GCTGGATCGC ATACATCGCG GGCGAGATGG TCGAGGTGTC GGGCGTGATC
GCGACCGTGA CGGCCGGCAT GATCGTCGGC TGGCATCAGC ACGAGGTGTT TTCGGCCGCC
GTGCGCACGC GCGGCACCGC GTTCTGGCAG GTCATCGTGT TCCTGCTCGA GGCGATGGTG
TTCGTGCTGA TCGGGCTGTC GCTGCGCGGC GCGATCCACC GGCTCGGCGG TTTCGAGCAG
GTGCTCGCCA CGATGGTGCC GCCGGTGCTC GCGGTGCTGG CGGCGGTGGT CGTGTCGCGC
TTCGTGTGGA TCTACGCGGT CGAGGCGCTG AAGCTGCCGG TGCGCGGGAT CATGAGGCGC
GGTTTCGCGC CCGACTGGAA GGCCGCGACG ATCATGAGCT GGGCCGGGAT GCGCGGGGTC
GTGACGCTGG CGATCGCGTT GTCGTTGCCG GAGGCGATGC CGGGCCGAGA CGTGATCCTG
GTCGCGTCGT TCGCGGTGAT CCTCGTCACC GTGCTGCTGC AGGGCACGAC CATCGGGCCG
CTGATCCGGC TGCTGCGCCT GCCTCCGCAC GAAGCGCGCG CCGCGCATCA CCTGACCGAG
CCGATGGCAT GGGCGCATAT CGAGGCGGCG CAGCTCGCGG CGATCCAGCC GCTGGTGCGC
GACGAGCGCG GCAACGTGAT TCACCCGCGC CTGCTGGAGC AATACACGTA TCGCGCGCAG
CTGACCGAGC GGGCGAAGAA CGAGCCGGCG TATCCGGCGG AGGTGCGCAC CGCGCACTAC
GACGTCGTGC TGGCCGCGAT CAAGGCCGGA CGTGCGGAAT TGTTGCGCCT GCATCGTTCG
GGGCGCATCC ACGACGAGAT GCTGCACATG CTCGAGCGGG ATCTCGATCT GCAGGAAGTG
TCCGCGCAGC ACGCGCGCGG GTAG
 
Protein sequence
MSPVSAFKLV LLSFLAIVAL ECIAKRLRLP PAAALLIGGI GIAFIPGLPP INLDPELVLL 
VFLPPLLMDG AYFSVWEEFK RNVGGILMLA IGAVVFTTFA VGFAVHWVVP SLPWAACFAL
GAIVSPPDAV AAKAVLERVA LPRRLMVLLE GESLLNDAAG LVLFRFAVAA ALTGAFSFEH
AVVRFAELGL GGVVVGYLVG KLVVWFLKLL DDDYLVITVA VIAGWIAYIA GEMVEVSGVI
ATVTAGMIVG WHQHEVFSAA VRTRGTAFWQ VIVFLLEAMV FVLIGLSLRG AIHRLGGFEQ
VLATMVPPVL AVLAAVVVSR FVWIYAVEAL KLPVRGIMRR GFAPDWKAAT IMSWAGMRGV
VTLAIALSLP EAMPGRDVIL VASFAVILVT VLLQGTTIGP LIRLLRLPPH EARAAHHLTE
PMAWAHIEAA QLAAIQPLVR DERGNVIHPR LLEQYTYRAQ LTERAKNEPA YPAEVRTAHY
DVVLAAIKAG RAELLRLHRS GRIHDEMLHM LERDLDLQEV SAQHARG