Gene Bamb_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5500 
Symbol 
ID4314389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2566556 
End bp2567446 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content70% 
IMG OID638153342 
ProductLysR family transcriptional regulator 
Protein accessionYP_777381 
Protein GI115360243 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGC GTCAGCTCCG GTACTTCATC GCGGTCGCGG AGGAAATGAA CATCACGCGG 
GCGGCGGAGC GGCTGCACAT GACGCAGCCG CCGCTGAGCC GCCAGCTTCA GGCGGTCGAG
GACGAGCTCG GGTTGCCGCT GTTCGAGCGC GGGGCGCGGC CGCTGAAACT GACCGACGCG
GGACGCGTGT TCTACGCGCA GGCGAAGCGC GTCGTCGAGC AGGCCGACGA GCTCGGGCCG
CTGACGCGGC GGCTCGCGCA GTTGTCGGAG CGGATCGTGA TCGGCTTCGT GCCGTCGACG
CTCTATGGCG CGCTGCCGGA CGTGATCCGC GCGTTTCGCG AGGCGCAGCC GAACGTCGAG
CTGTCGCTGA TCGAAATGTT CACGCTCGAA CAGCTCGGCG CGCTGAAGGG CGGGCGGATC
GACGTCGGGT TCGGCCGCCT GCGCTTCGAC GACGACCAGC TCGTGCGCGA GGCGCTGATC
GAGGAAAAGC TGATCGCGGC GCTGCCGGTC GGGCATCCGC TCGCGGATCC GGAACGGCCG
CTGACGCTGG CGGACATCGC GAACGAGACG CTGATCGTCT ATCCGAGCAC GCCGCGGCCA
AGCTTCGCGG ATCAGCAACT GTCCGCGCTG CGCGACGGCG CGCTGGTGCC GGCGGCCGTT
CACGAGGTGC GCGAGCTGCA GACGGCGCTC GGGCTCGTCG CCGCGCAGGT GGGTGTGTCG
CTGGTGCCGG AAAGCGTGGA GGGCGTGCGC GTGAGGGGCG TCGTCTACCG GCGGCTGCCG
GAACCGACGG CGACGTCGCC GATCATCATG AGCCGCCGGC TGCACGGCGA AAGTGCGGCG
ACGAGCGCGT TCTGTGCGAT CGCTCGGGAG ATGATCGTGC CGGTGGGGTA A
 
Protein sequence
MELRQLRYFI AVAEEMNITR AAERLHMTQP PLSRQLQAVE DELGLPLFER GARPLKLTDA 
GRVFYAQAKR VVEQADELGP LTRRLAQLSE RIVIGFVPST LYGALPDVIR AFREAQPNVE
LSLIEMFTLE QLGALKGGRI DVGFGRLRFD DDQLVREALI EEKLIAALPV GHPLADPERP
LTLADIANET LIVYPSTPRP SFADQQLSAL RDGALVPAAV HEVRELQTAL GLVAAQVGVS
LVPESVEGVR VRGVVYRRLP EPTATSPIIM SRRLHGESAA TSAFCAIARE MIVPVG