Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5500 |
Symbol | |
ID | 4314389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2566556 |
End bp | 2567446 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153342 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777381 |
Protein GI | 115360243 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGC GTCAGCTCCG GTACTTCATC GCGGTCGCGG AGGAAATGAA CATCACGCGG GCGGCGGAGC GGCTGCACAT GACGCAGCCG CCGCTGAGCC GCCAGCTTCA GGCGGTCGAG GACGAGCTCG GGTTGCCGCT GTTCGAGCGC GGGGCGCGGC CGCTGAAACT GACCGACGCG GGACGCGTGT TCTACGCGCA GGCGAAGCGC GTCGTCGAGC AGGCCGACGA GCTCGGGCCG CTGACGCGGC GGCTCGCGCA GTTGTCGGAG CGGATCGTGA TCGGCTTCGT GCCGTCGACG CTCTATGGCG CGCTGCCGGA CGTGATCCGC GCGTTTCGCG AGGCGCAGCC GAACGTCGAG CTGTCGCTGA TCGAAATGTT CACGCTCGAA CAGCTCGGCG CGCTGAAGGG CGGGCGGATC GACGTCGGGT TCGGCCGCCT GCGCTTCGAC GACGACCAGC TCGTGCGCGA GGCGCTGATC GAGGAAAAGC TGATCGCGGC GCTGCCGGTC GGGCATCCGC TCGCGGATCC GGAACGGCCG CTGACGCTGG CGGACATCGC GAACGAGACG CTGATCGTCT ATCCGAGCAC GCCGCGGCCA AGCTTCGCGG ATCAGCAACT GTCCGCGCTG CGCGACGGCG CGCTGGTGCC GGCGGCCGTT CACGAGGTGC GCGAGCTGCA GACGGCGCTC GGGCTCGTCG CCGCGCAGGT GGGTGTGTCG CTGGTGCCGG AAAGCGTGGA GGGCGTGCGC GTGAGGGGCG TCGTCTACCG GCGGCTGCCG GAACCGACGG CGACGTCGCC GATCATCATG AGCCGCCGGC TGCACGGCGA AAGTGCGGCG ACGAGCGCGT TCTGTGCGAT CGCTCGGGAG ATGATCGTGC CGGTGGGGTA A
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Protein sequence | MELRQLRYFI AVAEEMNITR AAERLHMTQP PLSRQLQAVE DELGLPLFER GARPLKLTDA GRVFYAQAKR VVEQADELGP LTRRLAQLSE RIVIGFVPST LYGALPDVIR AFREAQPNVE LSLIEMFTLE QLGALKGGRI DVGFGRLRFD DDQLVREALI EEKLIAALPV GHPLADPERP LTLADIANET LIVYPSTPRP SFADQQLSAL RDGALVPAAV HEVRELQTAL GLVAAQVGVS LVPESVEGVR VRGVVYRRLP EPTATSPIIM SRRLHGESAA TSAFCAIARE MIVPVG
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