| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5499 |
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| Symbol | |
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| ID | 4314388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2565331 |
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| End bp | 2566464 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153341 |
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| Product | muconate and chloromuconate cycloisomerases |
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| Protein accession | YP_777380 |
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| Protein GI | 115360242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCAA CTGCCGCCAC CATCGAGCGC ATCGACACGC TGCTCGTTGA CGTGCCAACG
ATCAGGCCCC ACAAACTGTC GGTCGCCACG ATGAATTGCC AGACCCTCGT GCTGGTCCGC
GTTCGATGCA CGGACGGTAT CGAAGGCGTC GGCGAGGCGA CGACGATCGG CGGTCTCGCA
TATGGCGAGG AGAGCCCCGA GAGCATCAAG GTCAACATCG ACACCTACTT CGCGCCGCTG
CTGCAAGGCA TGGACGCAAC GCGTCCCGGC GCCGCGATGG CGCGTGCGCG CAAGCTGTTC
CAGGGCAACC GGTTCGCGAA GTGCGCGATC GAAACCGCGC TGTTCGACGC GCAGGCGCGC
CGCGTCGGCG TGCCGCTGTC GGAACTGTTC GGCGGCCGCA CGACGGATGC GGTCGACGTC
GCATGGACGC TCGCGAGCGG CGATACGCAG CGCGACATCG CGGAAGCCGA GGCGATGCTC
GACGCGCGCC GCCATCGCGC ATTCAAGCTG AAGATCGGCT CGAACGCGGT CGACGACGAC
GTTGCGCACG TGATCGCGAT CAAGCGCGCA CTCGGCGAGC GCGGCGACGT CCGCGTCGAC
GTGAACCAGG CATGGAGCGA AACCGATGCG ATCCGGGCGG GCGCACGCCT CGCGGACGCC
GGCGTGAGCC TCGTCGAACA GCCCATCGCG GCGACCAATC GCGCGGGGCT GAAACGCCTC
ACGCAGCTCG CGCGGATTCC GATCATGGCC GACGAAGCGC TGCACGGCCC CGTCGATGCG
TTCGCGCTCG CGCAGGACCG CGCGGCCGAC GTGTTCGCGG TGAAGATCGC GCAATCGGGC
GGGCTACTCG GCGCGGCGAG CGTCGCATCG ATCGCGTCGG CGGCTGGCAT CGACCTGTAC
GGCGGCACGA TGCTCGAGGG CGCGGCCGGC ACGATGGCGT CCGCGCAGCT GTTCAGCACG
TTCGGCTCGC TGAAATGGGG CACCGAGCTA TTTGGCCCGC TGCTGCTCAC CGAGGAGATT
CTCGTCGAGC CGCTGCGCTA CCAGGATTTC AAGCTGCACC TGCCGGCGAC GCCCGGCCTC
GGCATCACCT TCGACTGGGC TCGCATCGAA CGGATGCGAC GCGACGCCCG CTGA
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| Protein sequence | MIATAATIER IDTLLVDVPT IRPHKLSVAT MNCQTLVLVR VRCTDGIEGV GEATTIGGLA
YGEESPESIK VNIDTYFAPL LQGMDATRPG AAMARARKLF QGNRFAKCAI ETALFDAQAR
RVGVPLSELF GGRTTDAVDV AWTLASGDTQ RDIAEAEAML DARRHRAFKL KIGSNAVDDD
VAHVIAIKRA LGERGDVRVD VNQAWSETDA IRAGARLADA GVSLVEQPIA ATNRAGLKRL
TQLARIPIMA DEALHGPVDA FALAQDRAAD VFAVKIAQSG GLLGAASVAS IASAAGIDLY
GGTMLEGAAG TMASAQLFST FGSLKWGTEL FGPLLLTEEI LVEPLRYQDF KLHLPATPGL
GITFDWARIE RMRRDAR
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