| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5498 |
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| Symbol | |
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| ID | 4314387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2564392 |
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| End bp | 2565294 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153340 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_777379 |
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| Protein GI | 115360241 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AAGCCATCGA CGCCCTGCTG AAGACCTTCG ACGACGCCGC GGAAAAGCCC
GGCAACCCGC GCGTGCGCGC GATCGTCAAC CGGATCGTGA AGGACATCTG CTACACGATC
GAGGACTTCG ACGTGCAGCC GAGCGAATTC TGGACCGCGC TCAACTACCT GAACGAAGCC
GGCCGTGAAT TCGGGCTGAT CGCCGCGGGC CTCGGCCTCG AGCGCTTCCT CGACGTGCGG
ATGGACGAGG CCGAGGAGAA GGCCGGCTTC CAGGGCGGCA CGCCGCGCAC AATCGAGGGG
CCGCTGTATG TCGCGGGCGC ACCGGAATCG GTCGGCCATG CGCGCCTCGA CGACGGCACC
GATCCGGGCC AGACGCTGAT CATGCGCGGC CGGGTGCTCG GTCAGGACGG CGCGCCGATC
GCGAACGCGC TCGTCGAGGT GTGGCACGCG AACCATCTCG GCAACTACTC GTACTTCGAT
CAATCGCAGC CCGCGTTCAA TCTGCGGCGC TCGATCCGCA CCGATGCCGA TGGCCGCTAC
AGCTTCCGCA GCGTGCTGCC GGTCGGCTAC AGCGTCCCGC CGGGCAGCAA GACCGAGCAG
CTGCTCGACC AGCTCGGCCG CCACGGCCAT CGTCCGGCGC ACATCCACTT CTTCGTTTCC
GCGGACGGAT ATCGTAAGCT GACGACGCAG ATCAACATCG AAGGCGATCC GCACATCTGG
GACGACTTCG CGTTCGCGAC CCGCGAAGGG CTGATCCCGA AGATCAATCA GGCCGAGGGC
GCGGAAGGCA AGCCGTATGG CGTCGACGGG CAGTTCGCGC TGATCGACTT CGATTTTTCG
CTGCTCAAGG ACAAGCAGGA CGTGCCGGCG AGCGAAGTCG AGCGGGCGCG GGCGCAAGCC
TGA
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| Protein sequence | MNKQAIDALL KTFDDAAEKP GNPRVRAIVN RIVKDICYTI EDFDVQPSEF WTALNYLNEA
GREFGLIAAG LGLERFLDVR MDEAEEKAGF QGGTPRTIEG PLYVAGAPES VGHARLDDGT
DPGQTLIMRG RVLGQDGAPI ANALVEVWHA NHLGNYSYFD QSQPAFNLRR SIRTDADGRY
SFRSVLPVGY SVPPGSKTEQ LLDQLGRHGH RPAHIHFFVS ADGYRKLTTQ INIEGDPHIW
DDFAFATREG LIPKINQAEG AEGKPYGVDG QFALIDFDFS LLKDKQDVPA SEVERARAQA
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