Gene Bamb_5496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5496 
Symbol 
ID4314385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2563211 
End bp2563996 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID638153338 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_777377 
Protein GI115360239 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.993327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTGC TGATCGTCTA TGCCCATCCC GAACCGCGTT CGCTGAACGG CGCGTTGCGG 
GACTTCGCGG TCGAGCATCT CGAAGCAGCG GGCCATGCCG TGCAGGTGAC CGATCTGTAC
GCGATGAACT GGAAGGCCGC GTTCGACGCG CATGACGTGA CCGACCGTGC GCCCGACGCG
CGCTTCGATC CCGCGCTCGA TTCGAAGCGT GCGTTCGAGA CGGGCACGCA GCGCGACGAC
ATCGCGCGCG AACAGGAGAA GCTGAAGTGG GCCGACGCGG TGATCCTGCA GTTTCCGCTG
TGGTGGTTCT CGATGCCGGC GATCATGAAG GGCTGGGTCG AGCGTGTGTA TGCGTATGGC
TTCGCGTACG GCGTCGGCGA GCATTCCGAC CAGCACTGGG GCGACCGTTA CGGCGAGGGC
TCGCTGGCGG GCAAGCGTGC GATGGTGATC GTCACGACGG GCGGCTGGGA GTCGCACTAC
AGCGCGCGCG GCATCAACGG GCCGATCGAC GACGTGCTGT TTCCGATCCA GCACGGGATT
TTGTATTACC CGGGGTTCGA CGTGCTGCCG CCGTTCGTGA TCTACCGGAC GGGGCGGATG
AACGACGTGC GCTTCGACGA AACGCGCGCG GCGCTCGGCA AGCGTCTCGA CGAACTGTGG
ACCGCACGGC CGATTCCGTT CCGGCGGCAG AATGCCGGGG ACTACGAGAT TCCGGCGCTG
ACGCTGAGGG CCGGGATCGC GCCGGAGAAG GTGGGGTTTG CGGCGCACCT CGCGCACGAG
CAGTGA
 
Protein sequence
MNVLIVYAHP EPRSLNGALR DFAVEHLEAA GHAVQVTDLY AMNWKAAFDA HDVTDRAPDA 
RFDPALDSKR AFETGTQRDD IAREQEKLKW ADAVILQFPL WWFSMPAIMK GWVERVYAYG
FAYGVGEHSD QHWGDRYGEG SLAGKRAMVI VTTGGWESHY SARGINGPID DVLFPIQHGI
LYYPGFDVLP PFVIYRTGRM NDVRFDETRA ALGKRLDELW TARPIPFRRQ NAGDYEIPAL
TLRAGIAPEK VGFAAHLAHE Q