Gene Bamb_5490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5490 
Symbol 
ID4314379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2556581 
End bp2557828 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID638153332 
Producthypothetical protein 
Protein accessionYP_777371 
Protein GI115360233 
COG category[S] Function unknown 
COG ID[COG1679] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.722523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGT TGAGCGAGCG CGACGACGCG ATGTTGCGCG GCGCATTCGG CGACGGCGTC 
GCACGCGCGA TGCGGATCGT CACGCGCACG GCCGAGGTCA TGTCGGCGCC GCACCTGATC
GACATCACGT CCGCGCATAT CGACGGCTGC CTTTACCACG GCCAGACGAG CCTCGACTTC
GTCGAGTATT TCGTCGACAC CGGCGCGCGC GTCGCGGTGC CGACCACGCT GAACGTCGGG
TCGCTCGACC TGATCCATCC CGAGCTGTAT CACGGCGATC GCACGATCGA GCGTGACGCC
CGGCGGCTGA TGGAGGCGCA TCTGCAGCTC GGCTGCGAAT CGAGCTTCAC GTGCGCGCCG
TATCAGCTGA AGAATCGTCC GCGCGTGGGC GAGCAGATCG CGTGGGCCGA ATCCAATGCA
ATCGTGTTCG CGAATTCGGT GCTCGGTGCG CGTACCAGCC GCTATGGCGA CTTTCTCGAC
TTGGCCGCCG CGATCACCGG GCGTGCGCCG TATGCGGGCC TGCACGTCGA ATCGAATCGC
GCGGCGCGGA TCGTATTCAA CGCGCCGGAC TTCGGCAACC GGCCGTCGCG CGACATCTAT
TTCGCGGCGC TCGGGTTGCT GATCGGCCGG ATCGCGGGCG CGATCGTCCC CGCGATCGTC
GGGCTGCCCG CGGACACCAC CGAAGACGAA CTCAAGGCCC TCGGCGCGGC CGCCGCATCG
AGCGGGGCCG TCGCGCTGTT CCATGCGGTG GGCATCACAC CCGAGGCGCC GACGCTCGAC
GCCGCGTTGC ACGGGCAGGC CGCGCAGCGA ACGGTCGATG TCGCGATGGC CGACCTCGAC
GAGATCCGCC GCACGTTGAA TCATGGCGCG GCCGGCGATG CGCTCGTCGC GGTCGCGCTC
GGCACGCCGC ATTTTTCGCT GGCCGAATTC CGCACGCTCG ACGCGCTGCT CGATCAGTTC
GACGGCAAAC CGAAGTGCGA TTTCTACGTG AACACGAGCC GCTTCATCCT GTGGGAGCTG
GGCGAGCTCG GGCTTGCCGA CAAATTCGAC GCGCGCGGCG TCCAGATCGT CGTCGACACC
TGCACGTACA TCACGCCGGT GATGAAACAG CTGTCGGGCC TGGTGATGAC CAACTCGGGG
AAGTGGGCGT CGTATGCGCC CGCGAACATC GGCGTGACGG TCGCGTACGG CAGCATGCGC
GAGTGCGTGC GCTCCGCGTT CGAGGGAAAG GTGCGATTCG ATGACTGA
 
Protein sequence
MLQLSERDDA MLRGAFGDGV ARAMRIVTRT AEVMSAPHLI DITSAHIDGC LYHGQTSLDF 
VEYFVDTGAR VAVPTTLNVG SLDLIHPELY HGDRTIERDA RRLMEAHLQL GCESSFTCAP
YQLKNRPRVG EQIAWAESNA IVFANSVLGA RTSRYGDFLD LAAAITGRAP YAGLHVESNR
AARIVFNAPD FGNRPSRDIY FAALGLLIGR IAGAIVPAIV GLPADTTEDE LKALGAAAAS
SGAVALFHAV GITPEAPTLD AALHGQAAQR TVDVAMADLD EIRRTLNHGA AGDALVAVAL
GTPHFSLAEF RTLDALLDQF DGKPKCDFYV NTSRFILWEL GELGLADKFD ARGVQIVVDT
CTYITPVMKQ LSGLVMTNSG KWASYAPANI GVTVAYGSMR ECVRSAFEGK VRFDD