| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5488 |
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| Symbol | |
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| ID | 4314377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2555057 |
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| End bp | 2555977 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153330 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_777369 |
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| Protein GI | 115360231 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.964929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACA TCGACAAGCT GCGGATCTTC CGGTCGGTGG TGGAAATGCG CAGCTTCACG
CGCGCCGCCG ACATGCACGG CCTCGCGCGG CCGGTCGTGT CGCGGGCGGT CGCGGATCTC
GAGGCGCGCT TCGGCAGCCG CCTGCTGCAC CGGACCACGC GCCAGGTCTC GCTGACCGAA
ACCGCCGAGC GCATCTACGA GCGCTGCGCG GCCGTGCTCG ACGAACTCGA CTCGCTGGAA
GCGCAGGCGC AGTCGCACAC GCGCGAGCCC GAGGGGCTGC TGCGCCTGGT CGCGCACACG
ACGGCCGCGC TGAACCGGCT CGTGCCGCTG ATCGCCGGCT TCAAGGCCGC GCATCCGAAG
GTGCGCCTCG ACGTCACGCT GACCGAGCGC CCGGTCGACC TCGTCGGCGA AGGCTACGAC
ATCGGCATCG TCGTGCCGTA CATGCTGACG AGCGAGACGA CCGTGGTGCG CCTGGTCGAA
CGCATTCCGG TGGTGATCGT CGCGACGCCC GCGTATCTGC GCGCGCATCC GCGTCCCGAG
ACGCCGGCCG CGCTCGCCGA GCATGCGTTC GTGCCGCTGT CGCCGTCGCT GCGCCGGCCC
GCGCTGTCGT TCCGCGTCGA CGGCGACACG CTGACCGTGC CGTTGAGCTT CGACGTCTCG
TCGAACAGCC CCGTCTTCAA CCGTGAAATG GTGATGCACG ACTTCGGCAT CGGCGTCGTG
CCGAGAACGC TCGTCGAGGC CGAACTCGCG TCGGGCGCCC TCGTGCAGTT GCTGGAAGAC
GCCGATCTGG TCGACGCGTT CGTGGAGATC AAGCTCGCTT ACGCAAACCG CGCGCTGCTG
CCCGCGAAGG TCAAGGCGTT CATCGACTAC ACGGCCGCGT ACTGCGACCA CGACGGCCGG
ATTGTTCCCG CCGCCGCGTG A
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| Protein sequence | MDYIDKLRIF RSVVEMRSFT RAADMHGLAR PVVSRAVADL EARFGSRLLH RTTRQVSLTE
TAERIYERCA AVLDELDSLE AQAQSHTREP EGLLRLVAHT TAALNRLVPL IAGFKAAHPK
VRLDVTLTER PVDLVGEGYD IGIVVPYMLT SETTVVRLVE RIPVVIVATP AYLRAHPRPE
TPAALAEHAF VPLSPSLRRP ALSFRVDGDT LTVPLSFDVS SNSPVFNREM VMHDFGIGVV
PRTLVEAELA SGALVQLLED ADLVDAFVEI KLAYANRALL PAKVKAFIDY TAAYCDHDGR
IVPAAA
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