| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5485 |
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| Symbol | |
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| ID | 4314374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2551774 |
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| End bp | 2553348 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153327 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_777366 |
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| Protein GI | 115360228 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.928776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CGTTTTCCGG CGACCCCGCG TCGCAACCGA CGAAGCAGCG CGTCTTCGCG
TTCGCGCTGA TGTGCGTCGG CTTCTTCATG GCGACGCTCG ACATCCAGAT CGTCGCGTCG
TCGCTGCGTG ACATCGGCGG CGGCCTGTCC GCCAGCCAGG ACGAGCTGTC GTGGGTGCAG
ACGGCCTACC TGATTGCCGA GATCATCGTG ATCCCGATGT CGGGCTGGCT GTCGAAGGTG
ATGTCGACGC GCTGGCTGTT CGTCGCGTCG GCGGTCGGCT TCACGATCAC GAGCATGCTG
TGCGGGCTCG CGTGGGACAT CAACTCGATG ATCCTGTTCC GCGGGCTGCA GGGCGCGCTC
GGCGCCGCGA TGATCCCGAC CGTGTTCACG ACCGCGTTCG TGCTGTTCCC GGGCAGGCAG
CGGCTGATCG CATCGACGAC GATCGGCGCG CTCGCGTCGC TCGCGCCGGC GATCGGGCCG
GTGATCGGCG GCTGGATCAC CGATCAATGG TCCTGGCACT GGCTGTTCTA CCTGAACCTG
GTGCCGGGCA TCGCCGTGGC CGTGCTGGTG CCGCGCTACG TGCATATCGA CGAACCCGAC
CCGAGCCTCC TCAAGCGCGG CGACTATCTC GGCATCGCGC TGATGTCGGG CTTCCTCGGC
TGCCTCGAAT ACGTGCTGGA GGAAGGCCCG CGCAAGAACT GGTTCAGCGA CGACGCGATC
GTGATCTGCG CGTGGATCTC CGCCATCTGC GGCTTCCTGT TCATCGTGCA CGCGCTGACC
GCGGACGATC CGGTCGTCGA CCTGCGCGCG CTCGCCGTGC GCAACTTCGG GATCGGCAGC
CTGCTGTCGT TCGTGACGGG CATCGGCATC TTCGTGACGG TATTCCTCAC GCCGCTGTTC
CTGTCGCAGG TGCGCGCGTT CAGTTCGCTG CAGATCGGCA TCGCGCTGCT GTCGGTCGGC
GCGTTCCAGC TGCTCGCGCT CTGCGCGTAT GCGTTCGCCG CGCGCTACTT CAGCATGCGC
GCGCTGCTCG TGTTCGGGCT TATCTGCTTC GGCCTCGGCT GCTACCTGTA CACGCCGATC
ACGCACGACT GGGGCTGGCG CGAACTGCTG CTGCCGCAGG CATTGCGCGG CATCGGCCAG
CAGTTCAGCG TGCCGCCGAT CGTGACGATG GCGCTGGGCT CGCTGCCGCA GTCGCGGCTG
AAATCGGCGA GCGGCCTGTT CAACCTGATG CGCAACCTGG GCGGCGCGAT CGGCATCGCG
GTGAGCGCGA CGATGCTCAA CGACCGGCTG AACTTTCACT ACCTGCGGCT GAACGAGCAC
GTGAGCGCCG GCGAGCCGCA GATCGCGTCG CTGCTCGATC GCCAGGCCGC GTACTGGACC
TCGGTGGCCG GCAACACGCT GGATACCGCC CAGGCCGGCC TCGCGAACCT GCATCGCCTG
ATCTATCGCG AAGCGCTGAC GCTCACCTAC GCGGATGCGT ACTACGCGCT GTCGCTGTGC
TTCATCGTCG CGCTGATCGC CGTCGCGTTT TCCCGTCCCA TTACCCTGAA CGCGCCGCCG
CCGGACGCGC ACTGA
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| Protein sequence | MTTAFSGDPA SQPTKQRVFA FALMCVGFFM ATLDIQIVAS SLRDIGGGLS ASQDELSWVQ
TAYLIAEIIV IPMSGWLSKV MSTRWLFVAS AVGFTITSML CGLAWDINSM ILFRGLQGAL
GAAMIPTVFT TAFVLFPGRQ RLIASTTIGA LASLAPAIGP VIGGWITDQW SWHWLFYLNL
VPGIAVAVLV PRYVHIDEPD PSLLKRGDYL GIALMSGFLG CLEYVLEEGP RKNWFSDDAI
VICAWISAIC GFLFIVHALT ADDPVVDLRA LAVRNFGIGS LLSFVTGIGI FVTVFLTPLF
LSQVRAFSSL QIGIALLSVG AFQLLALCAY AFAARYFSMR ALLVFGLICF GLGCYLYTPI
THDWGWRELL LPQALRGIGQ QFSVPPIVTM ALGSLPQSRL KSASGLFNLM RNLGGAIGIA
VSATMLNDRL NFHYLRLNEH VSAGEPQIAS LLDRQAAYWT SVAGNTLDTA QAGLANLHRL
IYREALTLTY ADAYYALSLC FIVALIAVAF SRPITLNAPP PDAH
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