Gene Bamb_5458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5458 
Symbol 
ID4314347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2521795 
End bp2522652 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID638153300 
Productalpha/beta hydrolase fold 
Protein accessionYP_777339 
Protein GI115360201 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA TCGTGACCGA GGAGACCTGG GTCGAGACGC CGCAAGGGCG TCTCTTCGCG 
AAGCGCTGGC GCGGTGCGCC TGCGGGGGAA ACGGCCGCGC CTGAGCCGGC CGCACCTACG
CCGGCCACAC CTACGCCGGT CGCACCTAAG CCGGCCGCAC CGATCGTGCT GCTGCACGAT
TCGCTCGGCT GCGTCGAACT ATGGCGCGAC TTCCCCGCCC GGCTCGCGCG CGCCACCGGC
CGCGACGTGA TCGCGTACGA CCGGCTCGGC TTCGGCCGGT CCGATCGTCA TCCGGGGCAG
CTCGCCGCGA CGTTCGTGCG CGACGAGGCT GGTCACGGAT TCCATGCGCT GCTCGAACGA
TTCGGCATCG ATGCGTTCGT CGCGTTCGGA CACAGCGTCG GCGGCGGGAT GGCGGTCGGG
TGCGCGGCCG CGTATCCGGC GCGTTGCCGC GCGCTGGTGA CGGTCGCCGC GCAGGCGTTC
GTCGAGGATC GCACGCGCGA CGGCATTCGC GACGCGGCGC AGCAGTTCGA CGCGCCCGGC
CAGCTCGACC GGCTCGCGCG CTATCACGGC GAGAAAGCCG AATGGGTGCT GCGTGCGTGG
GTCGACACGT GGCTGTCGCC GGCGTTTCGC GGCTGGAGCC TCGACGACGA ACTGCCGCGC
GTGCGCTGCG CGACGCTCGC GATTCACGGC GAGCAGGACG AATACGGGTC GGACGTGCAT
CCGAAGCGGA TCGCCGCGCG CGTCGCGGGG CCGTCGACGT TCCTGCTGCT CGACGGATGC
GGGCACATGC CGCATCGCGA GCGGCCCGAC GACGTACTCG CGGCGGTGGC GACGTTGCTG
CGCGACGCGC CTGCCTGA
 
Protein sequence
MTDIVTEETW VETPQGRLFA KRWRGAPAGE TAAPEPAAPT PATPTPVAPK PAAPIVLLHD 
SLGCVELWRD FPARLARATG RDVIAYDRLG FGRSDRHPGQ LAATFVRDEA GHGFHALLER
FGIDAFVAFG HSVGGGMAVG CAAAYPARCR ALVTVAAQAF VEDRTRDGIR DAAQQFDAPG
QLDRLARYHG EKAEWVLRAW VDTWLSPAFR GWSLDDELPR VRCATLAIHG EQDEYGSDVH
PKRIAARVAG PSTFLLLDGC GHMPHRERPD DVLAAVATLL RDAPA