| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5455 |
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| Symbol | |
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| ID | 4314344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2518351 |
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| End bp | 2519961 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153297 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_777336 |
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| Protein GI | 115360198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.402528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.936054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCA GGCGGCGCCC CCGATCCCGC TTGCGCCGGC TCCGGATGCC GGCCCGCTCA
ACGTTCGTCT CGTTTATGTC CGCACTTCCG AATTCCGACC CATCCGGTTC GCCCGCGAAC
CCACCCAAGC TTCATCGCGC GCTGAAGGCG CGCCATCTGA CGATGATCGC CATCGGCGGC
TCGATCGGCA CGGGCCTGTT CGTCGCGTCC GGCGCGTCGA TTTCGCAAGC CGGCCCCGGC
GGCGCGATGG TCGCGTACAT GCTGATCGGC CTGATGGTCT ACTTCCTGAT GACGAGCCTC
GGCGAAATGG CCGCGTTCAT GCCGGTGTCG GGCTCGTTCG CGACCTACGG CGCGAAATAC
GTCGACGAAG GCTTCGGCTT CGCGCTCGGC TGGAACTACT GGTACAACTG GGCGGTGACG
ATCGCGGTCG AACTCGTTGC CGCGCAGCTC GTGATGCACT ACTGGTTCCC GGACGTGCCG
GGCGTCTGGT GGAGCGCCGC GTTCCTCGCC GTGATGTTCC TGCTCAACGC GCTGACCGTT
CGCGGCTTTG GCGAAGCCGA ATACTGGTTC GCGCTGATCA AGGTCGTCAC GGTGGTCGCG
TTCATCGGCG TCGGCCTGCT GATGATCTTC GGCATTCTGA AGGGCGCGCC GGGCAACGGC
TGGGGCAACC TGACGATCGG CGACGCGCCA TTCGCGGGCG GCCTGCCGGC GCTGATGGGC
GTCGCGATGA TCGCGGGCTT CTCGTTCCAG GGCACCGAGC TGATCGGCGT CGCGGCCGGC
GAATCGGAGA ACCCGCGCAC GACGATCCCG CGCGCGGTGC GCCAGGTGTT CTGGCGCATC
CTGCTGTTCT ACGTGCTCGC GATCTTCGTG ATCGGCGTGC TGATTCCCTA TACCGACCCG
AGCCTGCTGA AGAGCGACGT GACCGACATC GGCGTGAGCC CGTTCACGCT CGTATTCCGC
CACGCGGGCC TCGCGTTCGC GGCCGGCGTG ATGAACGCGG TGATCCTGAC GGCCGTGCTG
TCGGCCGGCA ACTCGGGCAT GTACGCGTCG ACGCGGATGC TCTACAACCT CGCGACGGAA
GGCCGTGCGC CGAAGCTGTT CGCGAAGCTG TCGCCGGGCG GCGTGCCGCG CAATGCGCTG
TACGCGACCA CCGCCGTCGG CGCGCTGTGT TTCTTCACGT CGCTGTACGG CGACAAGACG
GTGTACCTGT GGCTGTTGAA CACGTCGGGC ATGACCGGTT TCATCGCGTG GCTCGGCATC
GCGATCAGCC ACTACCGGTT CCGCAAGGGC TACGTGAAGC AGGGCTACGC GGTCGACCAG
CTGCCGTACC AGTCGAAATG GTTTCCGTTC GGGCCGCTGT TCGCGTTCGT GCTGTGTCTC
GTGATCGCGC TGGGGCAGGA CTATCAGGCG TTCCTCGCGA ACCGGATCGA CTGGGCGAGC
GTGGCCGCGA CCTACGTCGG CATCCCGCTG TTCCTCGTCG TCTGGCTCGG CTACCGGTTC
CTGAACAAGA GCCGCTTCGT GCGCTACGAA GACATGGAAA TCGCGCCATG GGTGGCCGCG
AACCGCGGCG CGCAGACGCA GCGCGTGGCG AACCGCGAAA CCGCGGGCTG A
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| Protein sequence | MHRRRRPRSR LRRLRMPARS TFVSFMSALP NSDPSGSPAN PPKLHRALKA RHLTMIAIGG
SIGTGLFVAS GASISQAGPG GAMVAYMLIG LMVYFLMTSL GEMAAFMPVS GSFATYGAKY
VDEGFGFALG WNYWYNWAVT IAVELVAAQL VMHYWFPDVP GVWWSAAFLA VMFLLNALTV
RGFGEAEYWF ALIKVVTVVA FIGVGLLMIF GILKGAPGNG WGNLTIGDAP FAGGLPALMG
VAMIAGFSFQ GTELIGVAAG ESENPRTTIP RAVRQVFWRI LLFYVLAIFV IGVLIPYTDP
SLLKSDVTDI GVSPFTLVFR HAGLAFAAGV MNAVILTAVL SAGNSGMYAS TRMLYNLATE
GRAPKLFAKL SPGGVPRNAL YATTAVGALC FFTSLYGDKT VYLWLLNTSG MTGFIAWLGI
AISHYRFRKG YVKQGYAVDQ LPYQSKWFPF GPLFAFVLCL VIALGQDYQA FLANRIDWAS
VAATYVGIPL FLVVWLGYRF LNKSRFVRYE DMEIAPWVAA NRGAQTQRVA NRETAG
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