| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5440 |
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| Symbol | |
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| ID | 4314329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2488744 |
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| End bp | 2489826 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153282 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_777321 |
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| Protein GI | 115360183 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCT ACCGTATCGC GACCATTCCC GGCGACGGCA TCGGCAAGGA AGTGGTGCCG
GCCGGCAAGC AGCTGCTGGA AGCGCTGGCC CGCGGCAGCG ACCGCTTTGC GTTCGAGTTC
GAGGATTTCG ACTGGGGCGC CGATTACTAT CGCCAGCACG GCGCGATGAT GCCGGCCGAC
GGCCTCGACG CGCTGCGGGG CAAGGACGCG ATCCTGTTCG GCTCGGCGGG CGACCCCGAC
GTGCCCGACC ACGTGACGCT GTGGGGCCTG CGCCTGAAGA TTTGCCAGGG CTTCGACCAG
TACGCGAACG TGCGCCCGAC GCGCATCCTG CCCGGCATCG ACGCGCCGCT GAAGCGCTGC
GGGCCGGACG ACCTGAACTG GGTGATCGTG CGCGAGAACT CGGAGGGCGA ATACGCGGGC
GTCGGCGGCC GCGTGCACCA AGGGCATCCG ATCGAGGCCG CGACCGACGT GTCGATCCTC
ACGCGCGCCG GCGTCGAACG CATCATGCGT TTCGCGTTCC GGCTCGCGCA GTCGCGTCCG
CGCAAGCTGC TGACCGTCAT CACGAAGAGC AACGCGCAGC GTCACGCGAT GGTGATGTGG
GACGAGATCG CGAAGCAGGT CGCGCAGGAA TTCCCCGACG TCACGTGGGA CAAGGAACTC
GTCGACGCCG CGACCGCGCG CATGGTGAAC CGCCCGGCGT CGCTCGACAC GATCGTCGCG
ACGAACCTGC ACGCGGACAT CCTCAGCGAT CTCGCCGCCG CGCTCGCCGG CAGCCTCGGC
ATCGCGCCGA CCGGCAACAT CGATCCCGAG CGCCGCTATC CGTCGATGTT CGAGCCGATC
CACGGCTCCG CGTTCGACAT CATGGGCAAG GGCCTCGCGA ATCCGGTCGG CACGTTCTGG
TCGGTCGTGA TGCTGCTCGA GCATCTCGGC GAGACGGACG CCGCCGCGCG CGTGATGCAG
GCGATCGAGG CCGTCACGGC GGACGCGTCG CTGCATACGC GCGACCTCGG CGGCAGCGCG
AGTACCGCGC AGGTGACGGC GGCCGTCTGC GAGCGCGTCG CGAACGCGGC GGTCGTCGCC
TGA
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| Protein sequence | MKTYRIATIP GDGIGKEVVP AGKQLLEALA RGSDRFAFEF EDFDWGADYY RQHGAMMPAD
GLDALRGKDA ILFGSAGDPD VPDHVTLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
GPDDLNWVIV RENSEGEYAG VGGRVHQGHP IEAATDVSIL TRAGVERIMR FAFRLAQSRP
RKLLTVITKS NAQRHAMVMW DEIAKQVAQE FPDVTWDKEL VDAATARMVN RPASLDTIVA
TNLHADILSD LAAALAGSLG IAPTGNIDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW
SVVMLLEHLG ETDAAARVMQ AIEAVTADAS LHTRDLGGSA STAQVTAAVC ERVANAAVVA
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