| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5434 |
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| Symbol | |
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| ID | 4314323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2482564 |
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| End bp | 2484180 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153276 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_777315 |
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| Protein GI | 115360177 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.327506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CCGTCGCCAT CGGCTTTCTC GGCACCGTGC TCGACCAGGG CGGCCGCGCG
CCGCGCCGTT ACCGCAAGTG GCGGCCGACC GTGTCGCTCT GCATGCAGCC AGACTTCGCG
ATCGACCGGC TCGAACTGCT GCATCCGCCG GGCCACACGC GCCTCGCCAA TCAGGTGCGC
GACGATCTCG CGCATCTGTC GCCGGATACC GAGGTTCGCC TCACGCCGGT CACGATCCGC
GATCCGTGGG ATTTCGAGGA GGTCTACGCG ACGCTGCACG ACTTTGCGCG CGCCTATCCA
TTCGATCTGG ACCGCGAGGA CTACCTGGTC CACATCACGA CGGGCACGCA CGTCGCGCAG
ATCTGCTGGT TCCTGCTCGC GGAAGCGCGC TACCTGCCCG CGCGCCTCGT GCAGACGGGG
CCGCCGAAGC AGACCGACGA AGGGCCGAGC GGCCCCGGCA CGGTGTCGGT GATCGATCTC
GACCTGTCGC GCTACAACCG GATCGCGCAG CGCTTCACGC GCGAGCGCGA CGAAACGGTG
TCGTTCCTGA AGGCCGGCAT CGCGACGCGC AACGCGCGTT TCAACGCGCT GATCGAGCAA
CTGGAGCGCG TGGCCGTGCG CTCGCGCGCG CCGATGCTGC TCGTCGGTCC GACGGGCGCC
GGCAAGTCGT TTCTCGCGAA ACGCGTGTAC GAGTTGAAGC GCGGCCGCCA TCGGCTCGCA
GGCCCGTTCA TCGAGATCAA TTGCGCGACG CTGCGTGGCG ATGCTGCGAT GTCGACGCTG
TTCGGTCACG TGAAGGGCGC GTTCACGGGC GCGCAGTCGG CACGCGCCGG GCTGTTGCGC
GCGGCGGACG GCGGCCTGCT GTTTCTCGAC GAGATCGGCG AACTCGGGCT CGACGAGCAG
GCGATGCTGC TGAAGGCGAT CGAGGAGAAG CGCTTCCTGC CGGTCGGCGC GGACGTCGAG
ACGACCAGCG ATTTCGAGCT GATCGCGGGC ACGCATCGCG ACCTGCGGCA GATGGTGGCG
GCCGGCACGT TCCGCGAGGA TTTATATGCG CGGATCAATC TGTGGACGTA TGAATTGCCG
GGGTTGGCTG AGCGCCGCGA GGACATCGAG CCGAACCTCG AATTCGAGCT TGATCGATTC
GGCCGCGAGC AGGGCGAGCA GGTGCGGTTC AACGTGGAAG CGAAGCGGCG CTATCTCGCG
TTCGCGGCGT CGCCGCGCGC GGCATGGGCC GGCAACTTCC GCGAGCTGTC CGCATCGATC
ACGCGGATGG CGACGCTCGC CGATGCGGGG AGGATTACCG AGGCGATTGC CGAACAGGAG
GTCGAGCGGC TGACGCGCAC GTGGTCGTCA CCGGGCGGCG CGGGTGCATC GGATGGCTAC
GTCGACGCCG TGTTCGGAAC GCGTGCGGCG GAACTCGACT TGTTCGACCG CGCGCAACTC
GAACGCGTGC TCGACGTGTG CCGCGTGTCG GCAAGCCTGT CGGAGGCTGG GCGCACGCTG
TTCGCGGTAT CGCGGCAGAA CAAGAAGCAG CCGAACGATG CGGACCGGCT GCGCAAGTAT
CTCGCGCGCT TCGGGCTGGA TTGGGAGGGC GTGCGGCAGG TGCTGGACGC GAAGTAG
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| Protein sequence | MRKTVAIGFL GTVLDQGGRA PRRYRKWRPT VSLCMQPDFA IDRLELLHPP GHTRLANQVR
DDLAHLSPDT EVRLTPVTIR DPWDFEEVYA TLHDFARAYP FDLDREDYLV HITTGTHVAQ
ICWFLLAEAR YLPARLVQTG PPKQTDEGPS GPGTVSVIDL DLSRYNRIAQ RFTRERDETV
SFLKAGIATR NARFNALIEQ LERVAVRSRA PMLLVGPTGA GKSFLAKRVY ELKRGRHRLA
GPFIEINCAT LRGDAAMSTL FGHVKGAFTG AQSARAGLLR AADGGLLFLD EIGELGLDEQ
AMLLKAIEEK RFLPVGADVE TTSDFELIAG THRDLRQMVA AGTFREDLYA RINLWTYELP
GLAERREDIE PNLEFELDRF GREQGEQVRF NVEAKRRYLA FAASPRAAWA GNFRELSASI
TRMATLADAG RITEAIAEQE VERLTRTWSS PGGAGASDGY VDAVFGTRAA ELDLFDRAQL
ERVLDVCRVS ASLSEAGRTL FAVSRQNKKQ PNDADRLRKY LARFGLDWEG VRQVLDAK
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