| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5432 |
|---|
| Symbol | |
|---|
| ID | 4314321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2479470 |
|---|
| End bp | 2480693 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_777313 |
|---|
| Protein GI | 115360175 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACG ACGATTTTCA GGTGATGGAA CTGGCGAATG GCAAGCCGGT GAAGATGTGG
ACGCAAGGTG TCGCCGTCGA GGACGAAGCG CGCGCGCAAC TGCGCAACAC CGCGCAGATG
CCGTTCATCT TCAGCCACGT CGCGGTGATG CCGGACGTCC ACCTCGGCAA GGGCTCGACG
ATCGGCAGCG TGATCCCGAC GAAGGGCGCG ATCATTCCGG CCGCGGTCGG CGTCGACATC
GGTTGCGGGA TGATGGCCGC GCGCACGACG CTCACCGCCG CGGACCTGCC GGACTCGCTC
GGCGGGCTGC GCAGCGCGAT CGAGCGTGCG GTGCCGCACG GCCGCGCGCC GGGCCGTCGC
GATCCGGGCG CATGGGGCGA GCGCAGGCCG GCCGCCGTGA CCGAGTCGTG GAAGTCGCTG
CTGCCGGGCT TCAAGCGCAT CGTCGACAAG TATCCGAAGC TGGAAAAGAC GAACCACTAC
GCGCATCTCG GCACGCTCGG CACCGGCAAC CACTTCATCG AAGTGTGCGT CGACGAAGCG
GACCACGTGT GGTTCATGCT GCACAGCGGC TCGCGTGGCG TCGGCAATGC GATCGGCAGC
CTGTTCATCG AACTCGCGCA GGCCGACATG CGGCAGCACA TCGCGAACCT GCCGGATCGG
AACCTCGCGT ATTTCGCCGA GGGCAGCCGG CACTTCGACG ATTACGTCGA AGCGGTCGGC
TGGGCGCAGG ACTACGCGCG GCGCAACCGG CAGGCCATGA TGGATGCGGT GATCGGCGCG
GCGCGCGGCG TGATCGCGAA GCCGTTCTCG GTCGACGAAC ATGCGGTGAA CTGCCACCAC
AACTACGTGC AGCGCGAGCG CCACTTCGGC GAGGACGTGC TCGTGACGCG CAAGGGTGCG
GTGTCCGCGC AGAAGGGGCA GCTCGGGATC ATTCCGGGCT CGATGGGTGC GAAGAGCTTC
ATCGTGCGCG GGCTCGGCAA CCCGGAAAGC TTCTGCTCGT GCAGCCACGG CGCGGGCCGG
ACGATGAGCC GTACGGAAGC AAAGCGCCGC TTCACGGTCG ACGACCAGGT GAACGCGACG
CGCGGCGTCG AATGCCGGAA GGACGCGGGC GTCGTCGACG AAATTCCGAT GGCCTACAAG
GACATCGATG CGGTGATGGC GGCCCAGCGC AGCCTCGTCG AAGTGGTGCA TACGCTGCGG
CAGGTGGTGT GCGTGAAAGG ATAG
|
|---|
| Protein sequence | MSNDDFQVME LANGKPVKMW TQGVAVEDEA RAQLRNTAQM PFIFSHVAVM PDVHLGKGST
IGSVIPTKGA IIPAAVGVDI GCGMMAARTT LTAADLPDSL GGLRSAIERA VPHGRAPGRR
DPGAWGERRP AAVTESWKSL LPGFKRIVDK YPKLEKTNHY AHLGTLGTGN HFIEVCVDEA
DHVWFMLHSG SRGVGNAIGS LFIELAQADM RQHIANLPDR NLAYFAEGSR HFDDYVEAVG
WAQDYARRNR QAMMDAVIGA ARGVIAKPFS VDEHAVNCHH NYVQRERHFG EDVLVTRKGA
VSAQKGQLGI IPGSMGAKSF IVRGLGNPES FCSCSHGAGR TMSRTEAKRR FTVDDQVNAT
RGVECRKDAG VVDEIPMAYK DIDAVMAAQR SLVEVVHTLR QVVCVKG
|
|---|
| |