Gene Bamb_5431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5431 
Symbol 
ID4314320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2478602 
End bp2479414 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID638153272 
Productnucleotidyltransferase-like protein 
Protein accessionYP_777312 
Protein GI115360174 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG AAAAATTGAC ACCCGTGCGA AGCGCGCACC CGGTCGATCC GGCCGTACGG 
GCGCGCGTGA TGGCGGAACT TGCGGAAGTC GAACGCCGCC ACGATGTGAG CGTGCTGTTC
GCGTGCGAAT CGGGCAGCCG CGGCTGGGGG TTCGCGTCGC CGGACAGCGA TTACGACGTG
CGCTTCGTGT ATGCGCATCG ACGCGACTGG TACCTGAGCG TCGAACCGCA ACGCGACGTG
ATCGAGCGGC CGCTCGACGA CGAGCTCGAC GTCAGCGGCT GGGAGCTGTG CAAGGCGCTG
CAGCTGCTGC GCCGCTCGAA CCCGACGCTG CTCGAATGGC TCGACTCGCC CGTCGTGTAT
CGCGAAGATG CGCGCTGGGC GCCGCGGCTC AGGTCGCTGG CGTCGGCGTT CTTCTCGCCG
GTGCGTGGGC GTCACCACTA CCTCGCGATG GCGAAGAAGA ACTTTCGCGG CTACCTGCAA
GGCGACACGG TGCGCTACAA GAAATACCTG TACGTGCTGC GGCCGCTGCT CGCGGTGCGC
TGGATCGACA TGGGGCTCGG GATGCCGCCG ATGCGCTTCG CGGATCTCGT CGCCGGCACC
GTGCACGAGC CGGCGGTGCG CGCGGAACTC GACGCGTTGC TCGCGCTGAA GATGAGCGCG
AACGAAAGCG AATACGGGCC GCGCCGGCCG GCGATCCACG CGCTCGTCGA GACGATGCTC
GCCGATGCCG AACACGATCG CGAGTACAAG CGGCCGTGGG GCGACGTGGC GATGCTCGAT
GCGTTCCTGC GTGACGTGGT CGACGATCGA TGA
 
Protein sequence
MKTEKLTPVR SAHPVDPAVR ARVMAELAEV ERRHDVSVLF ACESGSRGWG FASPDSDYDV 
RFVYAHRRDW YLSVEPQRDV IERPLDDELD VSGWELCKAL QLLRRSNPTL LEWLDSPVVY
REDARWAPRL RSLASAFFSP VRGRHHYLAM AKKNFRGYLQ GDTVRYKKYL YVLRPLLAVR
WIDMGLGMPP MRFADLVAGT VHEPAVRAEL DALLALKMSA NESEYGPRRP AIHALVETML
ADAEHDREYK RPWGDVAMLD AFLRDVVDDR