Gene Bamb_5412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5412 
Symbol 
ID4314301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2458924 
End bp2460486 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content68% 
IMG OID638153253 
ProductFAD dependent oxidoreductase 
Protein accessionYP_777293 
Protein GI115360155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGA CGACGACCGA CGGGCGCGAC GCGCCGTCCG CCTGCGGCGA CAGCCGCGAC 
CTCGACGTGC TGATCGTCGG CGCCGGCCTG TCCGGCATCG GCGCCGCGTA TCACCTGAAA
AAGCGCTGCC CGTACGCGAG CGTCGCGATC GTCGAGGCGC GCGATGCGAT CGGCGGCACC
TGGGACCTGT TCCGCTATCC CGGCGTTCGT TCGGATTCCG ACATGTTCAC GCTCGGCTAC
AGCTTCCGCC CGTGGCACAG CGACAAGGCG ATCTCCGACG GGCAGACGAT TCTCGACTAC
ATCCGCGACA CGGCACGCGC GTACGGCATC GACAAGACGA TTCGCTACGG CCAGAAGGTG
GTCGCGGCCG ACTGGGATTC GAACCGCGCG CGCTGGACGG TGCGCATCGA GCGCACGCGG
GACGGTACGG TCGACACGCT CGTCTACACG TGCCGCTTCC TCTACATGTG CAGCGGCTAT
TACGACTACG ACGGCGGCTA CCTGCCCGAC TGGGCCGGCA TGGAATCGTT CGAAGGCCGC
ATCGTGCACC CGCAGCAATG GCCGAAGGAC CTGTCATATG CCAACCGGCG CGTCGTCGTG
ATCGGCAGCG GCGCGACGGC CGTCACGCTG GTGCCGTCGA TGGCCACCGA CGCGAAACAC
GTGACGATGC TGCAGCGCTC GCCGACCTAC ATCGTGTCGC TGCCCGCACG CGACAGGATC
GCGAACGCAT TGCGCCGCGT GCTGCCGTCG CGGCTCGCGC ACCGGCTCGT GCGCGTGAAG
AACGTGCTGC TGACGATGTA CCTGTACAAC GTGTCGCGCC GCAAGCCCGA GCAGACGAAG
CGGTTCATCA TCCGCGCGGC CGGCAAGCAG CTCGGCCCCG ACTTCGACGT CGCCAAGCAT
CTGACGCCGC GCTACATGCC GTGGGACCAG CGCGTGTGCC TCGTGCCGAA CGGCGACCTG
TTCAAGTCGA TCCGCGCGGG CCGCGCATCG ATCGTCACCG ACGAGATCGA GCGCTTCACG
CCGACCGGCC TGCAGCTGAA GAGCGGCCAG CAGCTCGACG CGGACGTGAT CGTCACCGCG
ACCGGGCTGA AGGTGAAGAT GCTCGGCGGC GCGCGCGTCA CGGTGGACGG CCGCCCGGTC
GACTTGCCGC AGACCGTGTC CTATAAAGGA ATGATGTACA GCGACGTGCC GAACCTCGCG
TCGTCGTTCG GTTACACGAA CGCATCGTGG ACGCTGAAGG CCGAGCTGAT CGCGCGCTAC
GTGTGCCGGC TGCTCAACCA CATGCGGGCG AACGGCTACG ACACCTGCGT GCCGCGGCTC
GGCGCCGGCG ACCTCGGCGA CGTGCCGGCG GTGAACCTGA GCTCGGGCTA CATCCAGCGC
GCGGCCGGCA TCCTGCCGAG GCAGGGGCAC CGCAAGCCCT GGAAATTCCA CCAGAACTAC
GTGCTCGATC TCGCATCGCT CAAGTTCAGC GGACTCGCCG ATTCCGCGAT GAAGTTCGAA
CGCCGCGCGA CAGCCGGCCC GGCCGCCGCG CCGGTTGCCG AACCCGTACT CGAAACCCGT
TGA
 
Protein sequence
MSSTTTDGRD APSACGDSRD LDVLIVGAGL SGIGAAYHLK KRCPYASVAI VEARDAIGGT 
WDLFRYPGVR SDSDMFTLGY SFRPWHSDKA ISDGQTILDY IRDTARAYGI DKTIRYGQKV
VAADWDSNRA RWTVRIERTR DGTVDTLVYT CRFLYMCSGY YDYDGGYLPD WAGMESFEGR
IVHPQQWPKD LSYANRRVVV IGSGATAVTL VPSMATDAKH VTMLQRSPTY IVSLPARDRI
ANALRRVLPS RLAHRLVRVK NVLLTMYLYN VSRRKPEQTK RFIIRAAGKQ LGPDFDVAKH
LTPRYMPWDQ RVCLVPNGDL FKSIRAGRAS IVTDEIERFT PTGLQLKSGQ QLDADVIVTA
TGLKVKMLGG ARVTVDGRPV DLPQTVSYKG MMYSDVPNLA SSFGYTNASW TLKAELIARY
VCRLLNHMRA NGYDTCVPRL GAGDLGDVPA VNLSSGYIQR AAGILPRQGH RKPWKFHQNY
VLDLASLKFS GLADSAMKFE RRATAGPAAA PVAEPVLETR