Gene Bamb_5390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5390 
Symbol 
ID4314279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2436536 
End bp2437912 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content69% 
IMG OID638153231 
Productmercuric reductase 
Protein accessionYP_777271 
Protein GI115360133 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC AATTCGACGC GATCGTCATC GGCACCGGGC AAGCCGGGCC GCCACTCGCG 
GCGCGGCTCG CCGGCGCCGG CATGAAAGTC GCGATCGTCG AGCGCGGCCG CTTCGGCGGC
ACCTGCGTCA ACACCGGCTG CATTCCGACC AAGACGCTGA TCGCGAGCGC ATACGCCGCG
CAGCTCGCGC GGCGCGCGGA AGAATACGGC GTGTCGGTCG GCCCCGTCAG CGTCGACATG
AAGGCCGTGA AGGCGCGCAA GGACCGGATC TCCGGCCGCT CGAACCACGG CGTCGAGCAA
TGGGTGCGCG GGCTCGACAA CACGACCGTG TTTCAGGGCC ACGCCCGCTT CGAACGCGCC
GATGCCGTGC GCGTGGGCGA CGAACTGCTC GAGGCCAAGC GCATCTTCAT CAACGTAGGC
GGGCGCGCGC AGATCCCGCA GATGCCGGGT CTCGACTCGG TGCCGTACCT GACCAACTCG
ACGATGATGG ACGTCGACTT CCTGCCCGAG CATCTCGTGA TCATCGGCGG CAGCTACGTC
GGGCTCGAAT TCGGCCAGAT GTACCGCCGC TTCGGCTCGA AGGTCACGAT CGTCGAGAAG
GGCTCGCGCC TGATCCATCG CGAGGACGAG GACGTGTCGC AGGCCGTGCG CGAGATTCTC
GAGAACGAAG GCATCGACGT GCAGCTCGAC GCGAACTGCC TGAATGCGCG GCGCGACGGC
GACGGCGTCG TGGTCGGCCT CGATTGCGCG GGCGGCGGCC GCGAGGTCGC GGGCTCGCAC
CTGCTGCTCG CCGTCGGCCG CGTGCCGAAC ACCGGCGACC TCGGGCTCGA CCAGGCCGGT
GTCGCGACCG ACTCGCGCGG CTACATCACG GTCGACGATC AACTGCGCAC CAACGTGCCC
GGCATCTGGG CGCTCGGCGA CTGCAACGGG CGCGGCGCGT TCACGCACAC CGCGTACAAC
GACTACGAGA TCGTCGCGGC GAACCTGCTC GACAGCGATC CGCGCAAGGT GTCCGACCGC
ATCGCCGCGT ACGCGATGTA CGTCGATCCG CCGCTCGGCC GCGTCGGCAT GACGCTCGCG
GAAGCGAAGC AGACTGGCCG TCGGCTGCTG GTCGGCACGC GGCCGATGAC GCGCGTCGGC
CGCGCGGTCG AAAAAGGCGA GAGCCAGGGT TTCATGAAGG TGATCGTCGA CGCGGACAGC
CACGCGATTC TCGGCGCGTC GATCCTCGGC GTGACGGGCG ACGAGGTCGT GCACGCGCTG
CTCGACGTGA TGGCCGCCGG CGCGCCGTAC ACGACGATCA GCCGCGCGAT GCACATCCAC
CCGACCGTGT CGGAACTCGT GCCGACGCTG CTGCAGGACC TGCATCCGGT CGAATGA
 
Protein sequence
MTQQFDAIVI GTGQAGPPLA ARLAGAGMKV AIVERGRFGG TCVNTGCIPT KTLIASAYAA 
QLARRAEEYG VSVGPVSVDM KAVKARKDRI SGRSNHGVEQ WVRGLDNTTV FQGHARFERA
DAVRVGDELL EAKRIFINVG GRAQIPQMPG LDSVPYLTNS TMMDVDFLPE HLVIIGGSYV
GLEFGQMYRR FGSKVTIVEK GSRLIHREDE DVSQAVREIL ENEGIDVQLD ANCLNARRDG
DGVVVGLDCA GGGREVAGSH LLLAVGRVPN TGDLGLDQAG VATDSRGYIT VDDQLRTNVP
GIWALGDCNG RGAFTHTAYN DYEIVAANLL DSDPRKVSDR IAAYAMYVDP PLGRVGMTLA
EAKQTGRRLL VGTRPMTRVG RAVEKGESQG FMKVIVDADS HAILGASILG VTGDEVVHAL
LDVMAAGAPY TTISRAMHIH PTVSELVPTL LQDLHPVE