Gene Bamb_5376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5376 
Symbol 
ID4314265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2420723 
End bp2421805 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID638153217 
ProductABC transporter related 
Protein accessionYP_777257 
Protein GI115360119 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.628457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC TCACGCTTAC GGATCTGACG AAATCGTTCG GCGAACTGAC CGCCGTCGCC 
GACGTCAACC TGTCGGTCGA ACAAGGCGAA TTCGTGTCGC TGCTCGGGCC GTCCGGCTGC
GGCAAGACCA CGACGCTGCA GATGATCGCC GGCTTCGTCG ACGTCACGCG CGGCCGCATC
GCGCTCGACG GGCAGGACAT CACGCACATG AAGCCGAACC GCCGCGGGCT CGGCATCGTG
TTCCAGAGCT ATGCGCTGTT TCCGCACATG AGCGTCGCGG AGAACGTCGG CTTCGGCCTC
GACATGCGCG GCGTCGACAA GGCGGAGCGC GCCGAGCGCA TCCGCGCGGC GCTCGCGCTC
GTGCGACTCG ATGCGCTCGC GCACCGCTTC CCGCGCGAAC TATCCGGCGG CCAGCGGCAG
CGCGTCGCGA TCGCGCGCGC GATCGTGATC GAACCGCCGG TGCTGCTGCT CGACGAGCCG
ATGTCGAATC TCGACGCGAA GCTGCGCGAG GACATGCAGT TCGAACTGCG CGCGATCCAG
CGCAAGATCG GCACGACGAC GATCATGGTC ACGCACGACC AGTCGGAAGC GCTGTCGATC
AGCGACCGCG TGGTCGTGAT GGAAGCCGGC CGCATCACGC AGACGGACAC GCCGTACCGC
GCGTACGAAC GTCCCGAGAA CCATTTCGTG TCGCAGTTCA TCGGCAAGGC GAACCTGCTG
CCCGGCACGA TCGTCGCGCA CGACGGCGAC GCGATCCGCA TCGACCTCGG CCACGATCTC
GCGGAAACGG GCCGCACCGC GCACCTGCCG GCGCGCGAGC GCGACATCCG TGTCGGCGAC
GCCGTGTCGG TCTGCATCCG CCCGGAAAAG CTGCGACTGT GCGCGCCGGG CGCAGGCCGC
TTCGCCGCGA CCGTCACGAG CCGCTTCTTC CTCGGCAGCC AGTGGCTGTA CCGCGTCGAC
AGCGCGCTCG GCGAAGTGCT CGTGTGCTGC CAGAACGAAG GCGCGGAGCC GCTCGCGGAA
GGCGCGCCGG TGGGCGTCGA CTGGCATAGC GACGCGGTGC GCGTGATGCG CCGGGAGGCC
TGA
 
Protein sequence
MSFLTLTDLT KSFGELTAVA DVNLSVEQGE FVSLLGPSGC GKTTTLQMIA GFVDVTRGRI 
ALDGQDITHM KPNRRGLGIV FQSYALFPHM SVAENVGFGL DMRGVDKAER AERIRAALAL
VRLDALAHRF PRELSGGQRQ RVAIARAIVI EPPVLLLDEP MSNLDAKLRE DMQFELRAIQ
RKIGTTTIMV THDQSEALSI SDRVVVMEAG RITQTDTPYR AYERPENHFV SQFIGKANLL
PGTIVAHDGD AIRIDLGHDL AETGRTAHLP ARERDIRVGD AVSVCIRPEK LRLCAPGAGR
FAATVTSRFF LGSQWLYRVD SALGEVLVCC QNEGAEPLAE GAPVGVDWHS DAVRVMRREA